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HIVsir ID
HIV Strain
NCBI Accession
Target Gene
Position of siRNA target
Sense Sequence of siRNA
Efficacy (%)
Target Conservation *
Cell line
PubMed
1272
95MM-yIDU106
N/A
LTR
505
GGGAACCCACUGCUUAAGCCU
94.00
584(39.04%)
Hela
17996047
1273
95MM-yIDU106
N/A
LTR
509
ACCCACUGCUUAAGCCUCAAU
95.50
652(43.58%)
Hela
17996047
1274
95MM-yIDU106
N/A
LTR
510
CCCACUGCUUAAGCCUCAAUA
97.00
654(43.72%)
Hela
17996047
1275
95MM-yIDU106
N/A
LTR
512
CACUGCUUAAGCCUCAAUAAA
95.50
462(30.88%)
Hela
17996047
1276
95MM-yIDU106
N/A
LTR
515
UGCUUAAGCCUCAAUAAAGCU
92.50
465(31.08%)
Hela
17996047
1277
95MM-yIDU106
N/A
LTR
521
AGCCUCAAUAAAGCUUGCCUU
100.00
446(29.81%)
Hela
17996047
1278
95MM-yIDU106
N/A
LTR
689
ACGCAGGACUCGGCUUGCUGA
67.20
733(49.00%)
Hela
17996047
1279
95MM-yIDU106
N/A
LTR
690
CGCAGGACUCGGCUUGCUGAA
61.20
574(38.37%)
Hela
17996047
1280
95MM-yIDU106
N/A
LTR
764
GACUAGCGGAGGCUAGAAGGA
98.50
752(50.27%)
Hela
17996047
1281
95MM-yIDU106
N/A
LTR
770
CGGAGGCUAGAAGGAGAGAGA
98.50
776(51.87%)
Hela
17996047
1282
95MM-yIDU106
N/A
Gag
1490
GUGACAUAGCAGGAACUACUA
98.50
899(60.09%)
Hela
17996047
1283
95MM-yIDU106
N/A
Gag
1817
UAGAAGAAAUGAUGACAGCAU
95.50
1177(78.68%)
Hela
17996047
1284
95MM-yIDU106
N/A
Gag
2075
GACAGGCUAAUUUUUUAGGGA
98.50
1015(67.85%)
Hela
17996047
1285
95MM-yIDU106
N/A
Pol
2329
AGCAGUACAAAUGGCAGUAUU
98.50
1129(75.47%)
Hela
17996047
1286
95MM-yIDU106
N/A
Pol
2330
AGGAGCAGAUGAUACAGUAUU
98.50
1159(77.47%)
Hela
17996047
1287
95MM-yIDU106
N/A
Pol
2333
AGCAGAUGAUACAGUAUUAGA
95.50
1129(75.47%)
Hela
17996047
1288
95MM-yIDU106
N/A
Pol
2485
GACCUACACCUGUCAACAUAA
95.50
888(59.36%)
Hela
17996047
1289
95MM-yIDU106
N/A
Pol
2486
ACCUACACCUGUCAACAUAAU
97.00
888(59.36%)
Hela
17996047
1290
95MM-yIDU106
N/A
Pol
3000
CAGGGAUGGAAAGGAUCACCA
100.00
883(59.02%)
Hela
17996047
1291
95MM-yIDU106
N/A
Pol
3005
AUGGAAAGGAUCACCAGCAAU
100.00
923(61.70%)
Hela
17996047
1292
95MM-yIDU106
N/A
Pol
3006
UGGAAAGGAUCACCAGCAAUA
92.50
957(63.97%)
Hela
17996047
1293
95MM-yIDU106
N/A
Pol
3011
AGGAUCACCAGCAAUAUUCCA
97.00
774(51.74%)
Hela
17996047
1294
95MM-yIDU106
N/A
Pol
4373
AGCCAUGCAUGGACAAGUAGA
95.00
658(43.98%)
Hela
17996047
1295
95MM-yIDU106
N/A
Pol
4378
UGCAUGGACAAGUAGACUGUA
94.00
699(46.72%)
Hela
17996047
1296
95MM-yIDU106
N/A
Pol
4652
UCCCUACAAUCCCCAAAGUCA
98.50
1005(67.18%)
Hela
17996047
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