HPVbase: Viral Resource for Papillomavirus and Biomarkers Study

HNSCC downregulated miRNAs

S.No.	mirbase ID	mature miR ID	miRNAs	Cytoband	Chromosome Coordinates	References
1	MI0000437	MIMAT0000416	hsa-miR-1-3p	18q11.2	18:19408965-19409049	19179615
2	MI0000263	MIMAT0000252	hsa-miR-7-5p	9q21.32	9:86584663-86584772	22761427 19179615
3	MI0000264	NA	hsa-miR-7-2	15q26.1	15:89155056-89155165	19179615
4	MI0000466	MIMAT0000441	hsa-miR-9-5p	1q22	1:156390133-156390221	19179615
5	MI0000468	NA	hsa-miR-9-3	15q26.1	15:89911248-89911337	19179615
6	MI0000266	MIMAT0000253	hsa-miR-10a-5p	17q21.32	17:46657200-46657309	20145181
7	MI0000267	MIMAT0000254	hsa-miR-10b-5p	2q31.1	2:177015031-177015140	19179615
8	MI0000115	NA	hsa-miR-16b	3q25.33	3:160122533-160122613	19179615
9	MI0000072	MIMAT0000072	hsa-miR-18a-5p	13q31.3	13:92003005-92003075	22736309
10	MI0000083	MIMAT0000082	hsa-miR-26a-5p	3p22.2	3:38010895-38010971	20145181
11	MI0000084	MIMAT0000083	hsa-miR-26b-5p	2q35	2:219267369-219267445	21326242
12	MI0000440	MIMAT0000419	hsa-miR-27b-3p	9q22.32	9:97847727-97847823	21326242
13	MI0000087	MIMAT0000086	hsa-miR-29a-3p	7q32.3	7:130561506-130561569	20652977
14	MI0000088	MIMAT0000087	hsa-miR-30a-5p	6q13	6:72113254-72113324	19179615
15	MI0000441	MIMAT0000420	hsa-miR-30b-5p	8q24.22	8:135812763-135812850	19179615
16	MI0000736	MIMAT0000244	hsa-miR-30c-5p	1p34.2	1:41222956-41223044	20145181
17	MI0000089	MIMAT0000089	hsa-miR-31-5p	9p21.3	9:21512114-21512184	22472886 22736309
18	MI0000095	MIMAT0000093	hsa-miR-93-5p	7q22.1	7:99691391-99691470	19179615
19	MI0000097	NA	hsa-miR-95	4p16.1	4:8007028-8007108	19179615
20	MI0000101	MIMAT0000097	hsa-miR-99a-5p	21q21.1	21:17911409-17911489	19179615 20145181 21326242
21	MI0000746	MIMAT0000689	hsa-miR-99b-5p	19q13.41	19:52195865-52195934	22472886
22	MI0000746	MIMAT0004678	hsa-miR-99b-3p	19q13.41	19:52195865-52195934	22472886
23	MI0000102	MIMAT0000098	hsa-miR-100-5p	11q24.1	11:122022937-122023016	20145181
24	MI0000103	MIMAT0000099	hsa-miR-101-3p	1p31.3	1:65524117-65524191	21326242
25	MI0000113	MIMAT0000103	hsa-miR-106a-5p	Xq26.2	X:133304228-133304308	19179615
26	MI0000443	MIMAT0000422	hsa-miR-124-3p	8p23.1	8:9760898-9760982	19179615
27	MI0000469	MIMAT0000443	hsa-miR-125a-5p	19q13.41	19:52196507-52196592	21326242
28	MI0000469	MIMAT0004602	hsa-miR-125a-3p	19q13.41	19:52196507-52196592	22472886
29	MI0000446	MIMAT0000423	hsa-miR-125b-5p	11q24.1	11:121970465-121970552	20145181 21326242
30	MI0000470	MIMAT0000423	hsa-miR-125b-5p	21q21.1	21:17962557-17962645	19179615
31	MI0000470	MIMAT0004603	hsa-miR-125b-3p	21q21.1	21:17962557-17962645	21326242
32	MI0000471	MIMAT0000445	hsa-miR-126-3p	9q34.3	9:139565054-139565138	21326242
33	MI0000472	MIMAT0000446	hsa-miR-127-3p	14q32.31	14:101349316-101349412	20145181 21326242
34	MI0000727	MIMAT0031095	hsa-miR-128-2-5p	3p22.3	3:35785968-35786051	19179615
35	MI0000448	MIMAT0000425	hsa-miR-130a-3p	11q12.1	11:57408671-57408759	19179615
36	MI0000450	NA	hsa-miR-133a-1	18q11.2	18:19405659-19405746	19179615
37	MI0000452	MIMAT0000428	hsa-miR-135a-5p	3p21.1	3:52328235-52328324	19179615
38	MI0000456	MIMAT0000431	hsa-miR-140-5p	16q22.1	16:69966984-69967083	19179615 20145181
39	MI0000458	MIMAT0000434	hsa-miR-142-3p	17q22	17:56408593-56408679	19179615
40	MI0000458	MIMAT0000433	hsa-miR-142-5p	17q22	17:56408593-56408679	20652977
41	MI0000459	MIMAT0000435	hsa-miR-143-3p	5q32	5:148808481-148808586	20145181 21326242
42	MI0000459	MIMAT0004599	hsa-miR-143-5p	5q32	5:148808481-148808586	21326242
43	MI0000461	MIMAT0000437	hsa-miR-145-5p	5q32	5:148810209-148810296	21326242
44	MI0000681	MIMAT0000646	hsa-miR-155-5p	21q21.3	21:26946292-26946356	19179615 20652977
45	MI0000269	MIMAT0000256	hsa-miR-181a-5p	9q33.3	9:127454721-127454830	20652977
46	MI0000289	NA	hsa-mir-181a-1	1q32.1	1:198828173-198828282	19179615
47	MI0000270	MIMAT0000257	hsa-miR-181b-5p	1q32.1	1:198828002-198828111	20652977 22472886
48	MI0000234	MIMAT0000222	hsa-miR-192	11q13.1	11:64658609-64658718	19179615
49	MI0003137	MIMAT0004767	hsa-miR-193b-5p	16p13.12	16:14397824-14397906	22472886
50	MI0000242	MIMAT0000231	hsa-miR-199a-5p	19p13.2	19:10928102-10928172	19179615
51	MI0000242	MIMAT0000232	hsa-miR-199a-3p	19p13.2	19:10928102-10928172	21326242
52	MI0000282	MIMAT0004563	hsa-miR-199b-3p	9q34.11	9:131007000-131007109	21326242
53	MI0000282	MIMAT0000263	hsa-miR-199b-5p	9q34.11	9:131007000-131007109	21326242 20145181
54	MI0000650	MIMAT0000617	hsa-miR-200c-3p	12p13.31	12:7072862-7072929	22472886
55	MI0000285	MIMAT0000266	hsa-miR-205-5p	1q32.2	1:209605478-209605587	19179615
56	MI0000292	MIMAT0000273	hsa-miR-216a-5p	2p16.1	2:56216085-56216194	19179615
57	MI0000294	MIMAT0000275	hsa-miR-218-5p	4p15.31	4:20529898-20530007	19179615 20652977
58	MI0000298	MIMAT0000278	hsa-miR-221-3p	Xp11.3	X:45605585-45605694	19179615 20652977
59	MI0000299	MIMAT0000279	hsa-miR-222-3p	Xp11.3	X:45606421-45606530	20652977
60	MI0000300	MIMAT0000280	hsa-miR-223-3p	Xq12	X:65238712-65238821	22736309
61	MI0000301	MIMAT0000281	hsa-miR-224-5p	Xq28	X:151127050-151127130	19179615
62	MI0000813	MIMAT0000761	hsa-miR-324-5p	17p13.1	17:7126616-7126698	19179615 22472886
63	MI0000767	MIMAT0000710	hsa-miR-365a-3p	16p13.12	16:14403142-14403228	20145181
64	MI0000778	NA	hsa-miR-370	14q32.2	14:101377476-101377550	19179615
65	MI0000781	MIMAT0000725	hsa-miR-373-5p	19q13.42	19:54291959-54292027	19179615
66	MI0000783	MIMAT0000728	hsa-miR-375	2q35	2:219866367-219866430	19351747 20145181 21326242
67	MI0000786	MIMAT0000732	hsa-miR-378a-3p	5q32	5:149112388-149112453	19179615 21326242
68	MI0000787	MIMAT0000733	hsa-miR-379-5p	14q32.31	14:101488403-101488469	21326242
69	MI0000789	NA	hsa-miR-381	14q32.31	14:101512257-101512331	21326242
70	MI0001735	MIMAT0001638	hsa-miR-409-5p	14q32.31	14:101531637-101531715	21326242
71	MI0001735	MIMAT0001639	hsa-miR-409-3p	14q32.31	14:101531637-101531715	21326242
72	MI0001444	MIMAT0001339	hsa-miR-422a	15q22.31	15:64163129-64163218	19179615
73	MI0001445	MIMAT0004748	hsa-miR-423-5p	17q11.2	17:28444097-28444190	22472886
74	MI0001446	MIMAT0004749	hsa-miR-424-3p	Xq26.3	X:133680644-133680741	19179615
75	MI0003133	MIMAT0002814	hsa-miR-432-5p	14q32.2	14:101350820-101350913	21326242
76	MI0001723	NA	hsa-miR-433	14q32.2	14:101348223-101348315	21326242
77	MI0002470	MIMAT0002177	hsa-miR-486-5p	8p11.21	8:41517959-41518026	22761427
78	MI0003161	MIMAT0002852	hsa-miR-517a-3p	19q13.42	19:54215522-54215608	21326242
79	MI0003631	MIMAT0003286	hsa-miR-617	12q21.31	12:81226312-81226408	21326242
80	MI0005559	MIMAT0004945	hsa-miR-744-5p	17p12	17:11985216-11985313	22472886
81	MI0005561	MIMAT0004949	hsa-miR-877-5p	6p21.33	6:30552109-30552194	22472886
82	MI0006273	NA	hsa-miR-1180	17p11.2	17:19247819-19247887	22472886
83	MI0003764	MIMAT0005458	hsa-miR-1224-5p	3q27.1	3:183959193-183959277	21326242
84	MI0006415	MIMAT0005929	hsa-miR-1275	6p21.31	6:33967749-33967828	22472886
85	MI0000060	NA	hsa-let-7a-1	9q22.32	9:96938239-96938318	20145181
86	MI0000061	NA	hsa-let-7a-2	11q24.1	11:122017230-122017301	19179615
87	MI0000062	NA	hsa-let-7a-3	22q13.31	22:46508629-46508702	19179615
88	MI0000064	MIMAT0000064	hsa-let-7c-5p	21q21.1	21:17912148-17912231	20145181
89	MI0000065	MIMAT0000065	hsa-let-7d-5p	9q22.32	9:96941116-96941202	19179615
90	MI0000066	MIMAT0000066	hsa-let-7e-5p	19q13.41	19:52196039-52196117	20145181 22472886
91	MI0000067	MIMAT0000067	hsa-let-7f-5p	9q22.32	9:96938629-96938715	19179615

Bioinformatics Centre (BIC), Institute of Microbial Technology (IMTECH), Council of Scientific and Industrial Research (CSIR)
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