HPVbase: Viral Resource for Papillomavirus and Biomarkers Study

HNSCC upregulated miRNAs

S.No.	mirbase ID	mature miR ID	miRNAs	Cytoband	Chromosome Coordinates	References
1	MI0000466	MIMAT0000441	hsa-miR-9-5p	1q22	1:156390133-156390221	22761427 22736309 23459718
2	MI0000466	MIMAT0000442	hsa-miR-9-3p	1q22	1:156390133-156390221	22761427
3	MI0000069	MIMAT0000068	hsa-miR-15a	13q14.2	13:50623255-50623337	20145181 22472886 23459718
4	MI0000438	MIMAT0000417	hsa-miR-15b	3q25.33	3:160122376-160122473	22761427 22472886 23459718
5	MI0000070	MIMAT0000069	hsa-miR-16-5p	13q14.2	13:50623109-50623197	20145181 22472886 23459718
6	MI0000071	MIMAT0000070	hsa-miR-17-5p	13q31.3	13:92002859-92002942	20145181
7	MI0000072	MIMAT0000072	hsa-miR-18a-5p	13q31.3	13:92003005-92003075	19351747
8	MI0001518	MIMAT0001412	hsa-miR-18b-5p	Xq26.2	X:133304071-133304141	19351747
9	MI0000074	MIMAT0000074	hsa-miR-19b-3p	13q31.3	13:92003446-92003532	20145181
10	MI0000076	MIMAT0000075	hsa-miR-20a-5p	13q31.3	13:92003319-92003389	20145181
11	MI0001519	MIMAT0001413	hsa-miR-20b-5p	Xq26.2	X:133303839-133303907	22472886
12	MI0001519	MIMAT0004752	hsa-miR-20b-3p	Xq26.2	X:133303839-133303907	22472886
13	MI0000077	MIMAT0000076	hsa-miR-21-5p	17q23.1	17:57918627-57918698	19179615 19351747 20145181 21326242 22472886 23459718
14	MI0000077	MIMAT0004494	hsa-miR-21-3p	17q23.1	17:57918627-57918698	21326242
15	MI0000439	MIMAT0000418	hsa-miR-23b-3p	9q22.32	9:97847490-97847586	19179615
16	MI0000080	MIMAT0000080	hsa-miR-24-3p	9q22.32	9:97848303-97848370	19179615
17	MI0000082	MIMAT0000081	hsa-miR-25-3p	7q22.1	7:99691183-99691266	20145181 23459718
18	MI0000084	MIMAT0000083	hsa-miR-26b-5p	2q35	2:219267369-219267445	22472886 23459718
19	MI0000085	MIMAT0000084	hsa-miR-27a-3p	19p13.13	19:13947254-13947331	20145181 23459718
20	MI0000085	MIMAT0004501	hsa-miR-27a-5p	19p13.13	19:13947254-13947331	21326242
21	MI0000440	MIMAT0000419	hsa-miR-27b-3p	9q22.32	9:97847727-97847823	23459718
22	MI0000086	MIMAT0000085	hsa-miR-28-5p	3q28	3:188406569-188406654	23459718
23	MI0000087	MIMAT0000086	hsa-miR-29a-3p	7q32.3	7:130561506-130561569	22472886 23459718
24	MI0000105	MIMAT0000100	hsa-miR-29b-3p	7q32.3	7:130562218-130562298	20145181
25	MI0000735	MIMAT0000681	hsa-miR-29c-3p	1q32.2	1:207975197-207975284	23459718
26	MI0000441	MIMAT0000420	hsa-miR-30b-5p	8q24.22	8:135812763-135812850	23459718
27	MI0000736	MIMAT0000244	hsa-miR-30c-5p	1p34.2	1:41222956-41223044	23459718
28	MI0000749	MIMAT0000692	hsa-miR-30e-5p	1p34.2	1:41220027-41220118	23459718
29	MI0000749	MIMAT0000693	hsa-miR-30e-3p	1p34.2	1:41220027-41220118	23459718
30	MI0000089	MIMAT0000089	hsa-miR-31-5p	9p21.3	9:21512114-21512184	21326242
31	MI0000091	MIMAT0000091	hsa-miR-33a-5p	22q13.2	22:42296948-42297016	19351747 20652977
32	MI0000268	MIMAT0004557	hsa-miR-34a-3p	1p36.22	1:9211727-9211836	22472886
33	MI0000093	MIMAT0000092	hsa-miR-92a-3p	13q31.3	13:92003568-92003645	20145181
34	MI0000095	MIMAT0000093	hsa-miR-93-5p	7q22.1	7:99691391-99691470	20145181 23459718
35	MI0000100	MIMAT0000096	hsa-miR-98-5p	Xp11.22	X:53583184-53583302	23459718
36	MI0000113	MIMAT0000103	hsa-miR-106a-5p	Xq26.2	X:133304228-133304308	20145181
37	MI0000734	MIMAT0000680	hsa-miR-106b-5p	7q22.1	7:99691616-99691697	20145181 23459718
38	MI0000734	MIMAT0004672	hsa-miR-106b-3p	7q22.1	7:99691616-99691697	21326242
39	MI0000446	MIMAT0000423	hsa-miR-125b-5p	11q24.1	11:121970465-121970552	22472886
40	MI0000748	MIMAT0000691	hsa-miR-130b-3p	22q11.21	22:22007593-22007674	19351747 20145181 23459718
41	MI0000449	MIMAT0000426	hsa-miR-132-3p	17p13.3	17:1953202-1953302	21326242 23459718
42	MI0000456	MIMAT0000431	hsa-miR-140-5p	16q22.1	16:69966984-69967083	23459718
43	MI0000458	MIMAT0000434	hsa-miR-142-3p	17q22	17:56408593-56408679	20145181
44	MI0000477	MIMAT0000449	hsa-miR-146a-5p	5q34	5:159912359-159912457	21326242 22472886 23459718
45	MI0003129	MIMAT0002809	hsa-miR-146b-5p	10q24.32	10:104196269-104196341	23459718
46	MI0003129	MIMAT0002809	hsa-miR-146b-5p	10q24.32	10:104196269-104196341	21326242 22472886
47	MI0000253	MIMAT0000243	hsa-miR-148a-3p	7p15.2	7:25989539-25989606	23459718
48	MI0000479	MIMAT0000451	hsa-miR-150-5p	19q13.33	19:50004042-50004125	22472886
49	MI0000809	MIMAT0000757	hsa-miR-151a-3p	8q24.3	8:141742663-141742752	19179615 23459718
50	MI0000681	MIMAT0000646	hsa-miR-155-5p	21q21.3	21:26946292-26946356	20145181 21326242 22761427 22472886 22736309
51	MI0000269	MIMAT0000256	hsa-miR-181a-5p	9q33.3	9:127454721-127454830	19351747 21326242
52	MI0000270	MIMAT0000257	hsa-miR-181b-5p	1q32.1	1:198828002-198828111	19351747 21326242
53	MI0003139	NA	hsa-miR-181d	19p13.13	19:13985689-13985825	19351747
54	MI0000274	MIMAT0000262	hsa-miR-187-3p	18q12.2	18:33484781-33484889	21326242 23459718
55	MI0000487	MIMAT0000459	hsa-miR-193a-3p	17q11.2	17:29887015-29887102	20145181 23459718
56	MI0003137	MIMAT0002819	hsa-miR-193b-3p	16p13.12	16:14397824-14397906	19351747
57	MI0000489	MIMAT0000461	hsa-miR-195-5p	17p13.1	17:6920934-6921020	23459718
58	MI0000489	MIMAT0004615	hsa-miR-195-3p	17p13.1	17:6920934-6921020	21326242
59	MI0000282	MIMAT0000263	hsa-miR-199b-5p	9q34.11	9:131007000-131007109	19179615
60	MI0000737	MIMAT0000682	hsa-miR-200a-3p	1p36.33	1:1103243-1103332	23459718
61	MI0000285	MIMAT0000266	hsa-miR-205-5p	1q32.2	1:209605478-209605587	20145181
62	MI0000286	NA	hsa-miR-210	11p15.5	11:568089-568198	20145181
63	MI0000298	MIMAT0000278	hsa-miR-221-3p	Xp11.3	X:45605585-45605694	19351747
64	MI0000300	MIMAT0000280	hsa-miR-223-3p	Xq12	X:65238712-65238821	20145181 21326242 23459718
65	MI0000745	MIMAT0000688	hsa-miR-301-3p	17q22	17:57228497-57228582	23459718
66	MI0000805	MIMAT0000753	hsa-miR-342-3p	14q32.2	14:100575992-100576090	22472886
67	MI0000825	MIMAT0000772	hsa-miR-345-5p	14q32.2	14:100774196-100774293	21326242 23459718
68	MI0000764	MIMAT0000707	hsa-miR-363-3p	Xq26.2	X:133303408-133303482	19351747 21326242 20652977 22472886
69	MI0000782	MIMAT0000727	hsa-miR-374a-5p	Xq13.2	X:73507121-73507192	23459718
70	MI0000786	MIMAT0000732	hsa-miR-378a-3p	5q32	5:149112388-149112453	20145181
71	MI0001445	MIMAT0001340	hsa-miR-423-3p	17q11.2	17:28444097-28444190	20145181
72	MI0001446	MIMAT0004749	hsa-miR-424-3p	Xq26.3	X:133680644-133680741	21326242
73	MI0001448	MIMAT0003393	hsa-miR-425-5p	3p21.31	3:49057581-49057667	23459718
74	MI0001641	MIMAT0001536	hsa-miR-429	1p36.33	1:1104385-1104467	23459718
75	MI0003513	MIMAT0003150	hsa-miR-455-5p	9q32	9:116971714-116971809	19351747
76	MI0003126	MIMAT0002807	hsa-miR-491-5p	9p21.3	9:20716104-20716187	19351747
77	MI0003188	MIMAT0002874	hsa-miR-503-5p	Xq26.3	X:133680358-133680428	21326242
78	MI0003205	MIMAT0002888	hsa-miR-532-5p	Xp11.23	X:49767754-49767844	23459718
79	MI0003608	MIMAT0003264	hsa-miR-596	8p23.3	8:1765397-1765473	22472886
80	MI0003610	NA	hsa-miR-598	8p23.1	8:10892716-10892812	22472886
81	MI0003639	MIMAT0003294	hsa-miR-625-5p	14q23.3	14:65937820-65937904	22472886
82	MI0006381	MIMAT0005898	hsa-miR-1246	2q31.1	2:177465708-177465780	21326242
83	MI0000067	MIMAT0000067	hsa-let-7f-5p	9q22.32	9:96938629-96938715	22472886 23459718
84	MI0000433	MIMAT0000414	hsa-let-7g-5p	3p21.1	3:52302294-52302377	22472886 23459718
85	MI0000434	MIMAT0000415	hsa-let-7i-5p	12q14.1	12:62997466-62997549	20145181

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