miRNA Id: | VMR_0021 |
Virus: | Bovine herpesvirus (BoHV1) |
Taxonomy: | View |
Nomenclature: | bhv1-miR-b1 |
miRNA Sequence: | acacgagaucuggacgacgag |
Length: | 21 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 57.14 |
pre-miRNA: | bhv1-mir-b1 |
pre-miRNA Sequence: | gacacgagaucuggacgacgagguccucggcguuggcggccgccgggaacgccagcccgucgcccgcgcacgacaggcacucaaugucaaagcacagcagcuuguaguc |
Arm: | 5p |
Cell line: | MDBK cells |
Method: | Solexa |
Reference: | 19793906 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |