VIRmiRNA -A database of viral miRNA
VMR_0021 details

miRNA Id:VMR_0021
Virus:Bovine herpesvirus (BoHV1)
Taxonomy:View
Nomenclature:bhv1-miR-b1
miRNA Sequence: acacgagaucuggacgacgag
Length: 21
Predicted secondary structure (UNAfold):
GC Content (%):57.14
pre-miRNA:bhv1-mir-b1
pre-miRNA Sequence:gacacgagaucuggacgacgagguccucggcguuggcggccgccgggaacgccagcccgucgcccgcgcacgacaggcacucaaugucaaagcacagcagcuuguaguc
Arm: 5p
Cell line: MDBK cells
Method:Solexa
Reference: 19793906
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed