VIRmiRNA -A database of viral miRNA
VMR_0028 details

miRNA Id:VMR_0028
Virus:Bovine herpesvirus 1 (BoHV1)
Taxonomy:View
Nomenclature:bhv1-miR-b6*
miRNA Sequence: cgucuccggcgccggguccuggc
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):82.61
pre-miRNA:bhv1-mir-b6
pre-miRNA Sequence:cgcggagggcaagugcccgacgcggggaacguggcggcggacgccagcgccgcgucuccggcgccggguccuggcccuccgcg
Arm: 3p
Cell line: MDBK cells
Method:Solexa(NGS)
Reference: 19793906
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed