VIRmiRNA -A database of viral miRNA
VMR_0087 details

miRNA Id:VMR_0087
Virus:Duck enteritis virus (DEV)
Taxonomy:View
Nomenclature:dev-miR-d5-5p
miRNA Sequence: ugucaucugcgacguccugcucg
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):60.87
pre-miRNA:dev-miR-d5
pre-miRNA Sequence:cgacaugucaucugcgacguccugcucguuguuaucauucgcguaggcggcgcaggugaauaggucg
Arm: 5p
Cell line: DF-1 cells
Method:Deep sequencing
Reference: 22492913
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed