miRNA Id: | VMR_0120 |
Virus: | Epstein Barr virus (EBV) |
Taxonomy: | View |
Nomenclature: | ebv-miR-bart21-5p |
miRNA Sequence: | ucacuagugaaggcaacuaac |
Length: | 21 |
Predicted secondary structure (UNAfold): | ![]() |
GC Content (%): | 42.86 |
pre-miRNA: | ebv-mir-bart21 |
pre-miRNA Sequence: | gggcuggguauucacuagugaaggcaacuaacacaguuagacgugcuaguugugcccacugguguuuauccggucc |
Arm: | 5p |
Cell line: | BL41, BL41/B95.8, Jijoye cells |
Method: | 454, Northern blot analysis |
Reference: | 19144710, 19881953 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |