VIRmiRNA -A database of viral miRNA
VMR_0120 details

miRNA Id:VMR_0120
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart21-5p
miRNA Sequence: ucacuagugaaggcaacuaac
Length: 21
Predicted secondary structure (UNAfold):
GC Content (%):42.86
pre-miRNA:ebv-mir-bart21
pre-miRNA Sequence:gggcuggguauucacuagugaaggcaacuaacacaguuagacgugcuaguugugcccacugguguuuauccggucc
Arm: 5p
Cell line: BL41, BL41/B95.8, Jijoye cells
Method:454, Northern blot analysis
Reference: 19144710, 19881953
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed