miRNA Id: | VMR_0121 |
Virus: | Epstein Barr virus (EBV) |
Taxonomy: | View |
Nomenclature: | ebv-miR-bart22 |
miRNA Sequence: | uuacaaagucauggucuaguagu |
Length: | 23 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 34.78 |
pre-miRNA: | ebv-mir-bart22 |
pre-miRNA Sequence: | gucacaggugcuagacccuggaguugaaccaguaccacucgguuacaaagucauggucuaguaguugugac |
Arm: | 3p |
Cell line: | C666-1 cells |
Method: | RT-PCR, 454, Northern blot analysis |
Reference: | 19091858, 19144710, 19881953 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |