VIRmiRNA -A database of viral miRNA
VMR_0121 details

miRNA Id:VMR_0121
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart22
miRNA Sequence: uuacaaagucauggucuaguagu
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):34.78
pre-miRNA:ebv-mir-bart22
pre-miRNA Sequence:gucacaggugcuagacccuggaguugaaccaguaccacucgguuacaaagucauggucuaguaguugugac
Arm: 3p
Cell line: C666-1 cells
Method:RT-PCR, 454, Northern blot analysis
Reference: 19091858, 19144710, 19881953
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed