VIRmiRNA -A database of viral miRNA
VMR_0129 details

miRNA Id:VMR_0129
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart4*
miRNA Sequence: cacaucacguaggcaccaggugu
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):56.52
pre-miRNA:ebv-mir-bart4
pre-miRNA Sequence:uuuggugggaccugaugcugcuggugugcuguaaauaagugccuagcacaucacguaggcaccaggugucaccagg
Arm: 3p
Cell line: Jijoye, BC-1 cells
Method:NGS, Northern blot analysis
Reference: 16557291, 19144710, 20808852
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed