VIRmiRNA -A database of viral miRNA
VMR_0131 details

miRNA Id:VMR_0131
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart5*
miRNA Sequence: gugggccgcuguucaccu
Length: 18
Predicted secondary structure (UNAfold):
GC Content (%):66.67
pre-miRNA:ebv-mir-bart5
pre-miRNA Sequence:gcucuguggcaccucaaggugaauauagcugcccaucgacguaucgcuggaaaccggugggccgcuguucaccuaaagugacgcaaggu
Arm: 3p
Cell line: Jijoye, BC-1 cells
Method:NGS, Northern blot analysis
Reference: 16557291, 19144710
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed