VIRmiRNA -A database of viral miRNA
VMR_0256 details

miRNA Id:VMR_0256
Virus:Human herpesvirus 6B (HHV-6)
Taxonomy:View
Nomenclature:hhv6b-miR-ro6-4
miRNA Sequence: auaccgagcggacuccgucgcc
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):63.64
pre-miRNA:pre-hhv6b-miR-Ro6-4
pre-miRNA Sequence:gaccgagcggcggauggagcccgcucggucucgcacguccgcgauaccgagcgggcuccgucgccgcuccgg
Arm: 3p
Cell line: Sup-T-1 cells
Method:Deep sequencing
Reference: 22114334
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed