VIRmiRNA -A database of viral miRNA
VMR_0258 details

miRNA Id:VMR_0258
Virus:Human immunodeficiency virus 1 (HIV1)
Taxonomy:View
Nomenclature:hiv1-miR-h1
miRNA Sequence: ccagggaggcgugccugggc
Length: 20
Predicted secondary structure (UNAfold):
GC Content (%):80
pre-miRNA:hiv1-mir-h1
pre-miRNA Sequence:uccagggaggcgugccugggcgggacuggggaguggcgcccucagauccugcauauaagcagcgcuuuuuucggugcguua
Arm: 5p
Cell line: na
Method:Cloned
Reference: 15782219
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed