miRNA Id: | VMR_0258 |
Virus: | Human immunodeficiency virus 1 (HIV1) |
Taxonomy: | View |
Nomenclature: | hiv1-miR-h1 |
miRNA Sequence: | ccagggaggcgugccugggc |
Length: | 20 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 80 |
pre-miRNA: | hiv1-mir-h1 |
pre-miRNA Sequence: | uccagggaggcgugccugggcgggacuggggaguggcgcccucagauccugcauauaagcagcgcuuuuuucggugcguua |
Arm: | 5p |
Cell line: | na |
Method: | Cloned |
Reference: | 15782219 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |