VIRmiRNA -A database of viral miRNA
VMR_0307 details

miRNA Id:VMR_0307
Virus:Herpes Simplex Virus 1 (HSV1)
Taxonomy:View
Nomenclature:hsv1-miR-h4
miRNA Sequence: gguagaguuugacaggcaagca
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):50
pre-miRNA:hsv1-mir-H4
pre-miRNA Sequence:gccggggugguagaguuugacaggcaagcaugugcgugcagaggcgaguagugcuugccugucuaacucgcuagucucggc
Arm: 5p
Cell line: HEK293 cells
Method:RT-PCR,Western blot analysis
Reference: 23536669
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed