VIRmiRNA -A database of viral miRNA
VMR_0344 details

miRNA Id:VMR_0344
Virus:Herpesvirus saimiri strain A11 (HVSA)
Taxonomy:View
Nomenclature:hvsa-miR-hsur2-3p
miRNA Sequence: uuuuagagccuugagagcacu
Length: 21
Predicted secondary structure (UNAfold):
GC Content (%):42.86
pre-miRNA:hvsa-mir-hsur2
pre-miRNA Sequence:ucugugcucucaaggcuuuaaacuuuguguuuaaaaguuuuagagccuugagagcacu
Arm: 3p
Cell line: HEK293T cells
Method:Solexa(NGS)
Reference: 21925386
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed