VIRmiRNA -A database of viral miRNA
VMR_0377 details

miRNA Id:VMR_0377
Virus:Herpesvirus of turkeys (HVT)
Taxonomy:View
Nomenclature:hvt-miR-h9-5p
miRNA Sequence: uuucucauggacccccgaguugugu
Length: 25
Predicted secondary structure (UNAfold):
GC Content (%):52
pre-miRNA:hvt-mir-h9
pre-miRNA Sequence:gcauacuuucucauggacccccgaguugugucuauucguuaacagcuaggccguccaugaggucguaggc
Arm: 5p
Cell line: CEF, CK, CEK cells
Method:Solexa(NGS), Cloned
Reference: 19328516, 19403687
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed