VIRmiRNA -A database of viral miRNA
VMR_0417 details

miRNA Id:VMR_0417
Virus:Kaposi sarcoma-associated herpesvirus (KSHV)
Taxonomy:View
Nomenclature:kshv-miR-k12-9
miRNA Sequence: cuggguauacgcagcugcguaa
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):54.55
pre-miRNA:kshv-mir-k12-9
pre-miRNA Sequence:gggucuacccagcugcguaaaccccgcugcguaaacacagcuggguauacgcagcugcguaaaccc
Arm: 3p
Cell line: BC-1, BCBL-1, BJAB cells
Method:Cloned
Reference: 15800047, 20566670
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed