miRNA Id: | VMR_0468 |
Virus: | Mareks disease virus type 1 (MDV1) |
Taxonomy: | View |
Nomenclature: | mdv1-miR-m3-5p_-1_5 |
miRNA Sequence: | ugaaaaugugaaaccucucccgc |
Length: | 23 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 47.83 |
pre-miRNA: | na |
pre-miRNA Sequence: | na |
Arm: | 5p |
Cell line: | MSB1 |
Method: | Deep sequencing |
Reference: | 24449754 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |