miRNA Id: | VMR_0472 |
Virus: | Mareks disease virus type 1 (MDV1) |
Taxonomy: | View |
Nomenclature: | mdv1-miR-m5 |
miRNA Sequence: | uguguaucguggucgucuacugu |
Length: | 23 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 47.83 |
pre-miRNA: | mdv1-mir-m5 |
pre-miRNA Sequence: | ucaugaaccguaugcgaucacauugacacgguuuaaaauacauacguguguaucguggucgucuacuguuugugg |
Arm: | 3p |
Cell line: | MSBI, CU91, UA30 cells |
Method: | Northern blot analysis, Solexa(NGS) |
Reference: | 16912324, 18256158, 18842708, 24449754 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |