VIRmiRNA -A database of viral miRNA
VMR_0978 details

miRNA Id:VMR_0978
Virus:Rhesus lymphocryptovirus (RLCV)
Taxonomy:View
Nomenclature:rlcv-miR-rl1-17-5p
miRNA Sequence: ugauggacagcggggaagugca
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):59.09
pre-miRNA:na
pre-miRNA Sequence:caugcccgugguguucugauggacagcggggaagugcacuugugcuuauguaaucggugcuucgcccucuccaucauaauaacacgaggaug
Arm: 5p
Cell line: BJAB cells
Method:Northern blot analysis
Reference: 20219930
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed