miRNA Id: | VMR_1110 |
Virus: | Rhesus rhadinovirus (RRV) |
Taxonomy: | View |
Nomenclature: | rrv-miR-rr1-3-3p |
miRNA Sequence: | aggguuugcgacagacac |
Length: | 18 |
Predicted secondary structure (UNAfold): | ![]() |
GC Content (%): | 55.56 |
pre-miRNA: | rrv-mir-rr1-3 |
pre-miRNA Sequence: | cagggcccgaugagcaguuaguccguguuuagucgcgcucccuguuguguuuaaauuuaacaggguuugcgacagacacugauucgcugcccaaagucgccguu |
Arm: | 3p |
Cell line: | HEK293T cells |
Method: | Deep sequencing |
Reference: | 20655562 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |