VIRsiRNAdb

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Total number of Results for Yellow Fever Virus are 4
Results from 0 - 25

siRNA sequence "ugcccguuuucaaaccggg" alignment with "Yellow Fever Virus" virus reference Genome sequences
siRNA sequence matching with "ugcccguuuucaaaccggg" Yellow Fever Virus" Virus reference Genome sequences
Browse all the records for "Yellow Fever Virus" virus
Browse "virsi2308 " record
Length: 19
GC Content:58 %
Strain of Virus: 17DD
GenBank Acc: NC_002031
Transfection Reagent: Lipofectamine 2000

Offtargets for "ugcccguuuucaaaccggg" siRNA in Human Genome sequences
See NC_002031 at Genbank
Pubmed:19169857
Article:RNA interference inhibits yellow fever virus replication in vitro and in vivo.
Authors:Pacca CC, Severino AA, Mondini A, Rahal P, D'avila SG, Cordeiro JA, Nogueira MC, Bronzoni RV, Nogueira ML.
Journal:Virus Genes. 2009 Apr;38(2):224-31. Epub 2009 Jan 25.
Entrez:19169857

siRNA sequence "gucgaguucauucgguaug" alignment with "Yellow Fever Virus" virus reference Genome sequences
siRNA sequence matching with "gucgaguucauucgguaug" Yellow Fever Virus" Virus reference Genome sequences
Browse all the records for "Yellow Fever Virus" virus
Browse "virsi2307 " record
Length: 19
GC Content:47 %
Strain of Virus: 17DD
GenBank Acc: NC_002031
Transfection Reagent: Lipofectamine 2000

Offtargets for "gucgaguucauucgguaug" siRNA in Human Genome sequences
See NC_002031 at Genbank
Pubmed:19169857
Article:RNA interference inhibits yellow fever virus replication in vitro and in vivo.
Authors:Pacca CC, Severino AA, Mondini A, Rahal P, D'avila SG, Cordeiro JA, Nogueira MC, Bronzoni RV, Nogueira ML.
Journal:Virus Genes. 2009 Apr;38(2):224-31. Epub 2009 Jan 25.
Entrez:19169857

siRNA sequence "ggaccgacauuguggaggu" alignment with "Yellow Fever Virus" virus reference Genome sequences
siRNA sequence matching with "ggaccgacauuguggaggu" Yellow Fever Virus" Virus reference Genome sequences
Browse all the records for "Yellow Fever Virus" virus
Browse "virsi2305 " record
Length: 19
GC Content:58 %
Strain of Virus: 17DD
GenBank Acc: NC_002031
Transfection Reagent: Lipofectamine 2000

Offtargets for "ggaccgacauuguggaggu" siRNA in Human Genome sequences
See NC_002031 at Genbank
Pubmed:19169857
Article:RNA interference inhibits yellow fever virus replication in vitro and in vivo.
Authors:Pacca CC, Severino AA, Mondini A, Rahal P, D'avila SG, Cordeiro JA, Nogueira MC, Bronzoni RV, Nogueira ML.
Journal:Virus Genes. 2009 Apr;38(2):224-31. Epub 2009 Jan 25.
Entrez:19169857

siRNA sequence "aggagguuuggcggaacag" alignment with "Yellow Fever Virus" virus reference Genome sequences
siRNA sequence matching with "aggagguuuggcggaacag" Yellow Fever Virus" Virus reference Genome sequences
Browse all the records for "Yellow Fever Virus" virus
Browse "virsi2306 " record
Length: 19
GC Content:58 %
Strain of Virus: 17DD
GenBank Acc: NC_002031
Transfection Reagent: Lipofectamine 2000

Offtargets for "aggagguuuggcggaacag" siRNA in Human Genome sequences
See NC_002031 at Genbank
Pubmed:19169857
Article:RNA interference inhibits yellow fever virus replication in vitro and in vivo.
Authors:Pacca CC, Severino AA, Mondini A, Rahal P, D'avila SG, Cordeiro JA, Nogueira MC, Bronzoni RV, Nogueira ML.
Journal:Virus Genes. 2009 Apr;38(2):224-31. Epub 2009 Jan 25.
Entrez:19169857


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2308	ugcccguuuucaaaccggg	Yellow Fever Virus	NS1	Vero E6	Plaque Count	97	19169857	Blast SL	refseqs
virsi2307	gucgaguucauucgguaug	Yellow Fever Virus	E	Vero E6	Plaque Count	68	19169857	Blast SL	refseqs
virsi2305	ggaccgacauuguggaggu	Yellow Fever Virus	NS5	Vero E6	Plaque Count	29	19169857	Blast SL	refseqs
virsi2306	aggagguuuggcggaacag	Yellow Fever Virus	NS5	Vero E6	Plaque Count	12	19169857	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm