VIRsiRNAdb

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Total number of Results for 14592428 are 10
Results from 0 - 25

siRNA sequence "cauggagagcacaacauca" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "cauggagagcacaacauca" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1460 " record
Length: 19
GC Content:47 %
Starting position: 157
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cauggagagcacaacauca" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "guuauauggaugauguggu" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "guuauauggaugauguggu" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1463 " record
Length: 19
GC Content:37 %
Starting position: 736
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "guuauauggaugauguggu" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "gacuucaaccccaacaagg" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "gacuucaaccccaacaagg" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1468 " record
Length: 19
GC Content:53 %
Starting position: 2979
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gacuucaaccccaacaagg" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "cguuucuccuggcucaguu" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "cguuucuccuggcucaguu" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1462 " record
Length: 19
GC Content:53 %
Starting position: 660
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cguuucuccuggcucaguu" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "gaccuugaggcauacuuca" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "gaccuugaggcauacuuca" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1465 " record
Length: 19
GC Content:47 %
Starting position: 1694
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gaccuugaggcauacuuca" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "augccccuaucuuaucaac" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "augccccuaucuuaucaac" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1467 " record
Length: 19
GC Content:42 %
Starting position: 2309
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "augccccuaucuuaucaac" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "gacuacugccucacccaua" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "gacuacugccucacccaua" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1459 " record
Length: 19
GC Content:53 %
Starting position: 99
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gacuacugccucacccaua" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "uucaccucugcacgucgca" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "uucaccucugcacgucgca" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1464 " record
Length: 19
GC Content:58 %
Starting position: 1592
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "uucaccucugcacgucgca" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "uucaccucugccuaaucau" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "uucaccucugccuaaucau" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1466 " record
Length: 19
GC Content:42 %
Starting position: 1826
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "uucaccucugccuaaucau" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428

siRNA sequence "gacuaccaagguauguugc" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "gacuaccaagguauguugc" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1461 " record
Length: 19
GC Content:47 %
Starting position: 451
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gacuaccaagguauguugc" siRNA in Human Genome sequences
See at Genbank
Pubmed:14592428
Article:Inhibition of hepatitis B virus replication by stably expressed shRNA.
Authors:Chen Y, Du D, Wu J, Chan CP, Tan Y, Kung HF, He ML.
Journal:Biochem Biophys Res Commun. 2003 Nov 14;311(2):398-404.
Entrez:14592428


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1460	cauggagagcacaacauca	Hepatitis B Virus [HBV]	P/S	HepG2	RNA	98	14592428	Blast SL	refseqs
virsi1463	guuauauggaugauguggu	Hepatitis B Virus [HBV]	P/S	HepG2	RNA	97	14592428	Blast SL	refseqs
virsi1468	gacuucaaccccaacaagg	Hepatitis B Virus [HBV]	PreS/P	HepG2	RNA	96	14592428	Blast SL	refseqs
virsi1462	cguuucuccuggcucaguu	Hepatitis B Virus [HBV]	P/S	HepG2	RNA	93	14592428	Blast SL	refseqs
virsi1465	gaccuugaggcauacuuca	Hepatitis B Virus [HBV]	X	HepG2	RNA	92	14592428	Blast SL	refseqs
virsi1467	augccccuaucuuaucaac	Hepatitis B Virus [HBV]	C/P	HepG2	RNA	88	14592428	Blast SL	refseqs
virsi1459	gacuacugccucacccaua	Hepatitis B Virus [HBV]	PreS/P	HepG2	RNA	85	14592428	Blast SL	refseqs
virsi1464	uucaccucugcacgucgca	Hepatitis B Virus [HBV]	X	HepG2	RNA	80	14592428	Blast SL	refseqs
virsi1466	uucaccucugccuaaucau	Hepatitis B Virus [HBV]	X	HepG2	RNA	80	14592428	Blast SL	refseqs
virsi1461	gacuaccaagguauguugc	Hepatitis B Virus [HBV]	P/S	HepG2	RNA	76	14592428	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm