VIRsiRNAdb

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Total number of Results for 17139181 are 16
Results from 0 - 25

siRNA sequence "gaucuucuggucuaaacga" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaucuucuggucuaaacga" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1302 " record
Length: 19
GC Content:42 %
Starting position: 26333
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gaucuucuggucuaaacga" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gaucuucuggucuaaacga" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaucuucuggucuaaacga" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1317 " record
Length: 19
GC Content:42 %
Starting position: 26333
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gaucuucuggucuaaacga" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "ggaggaacuuagauucccu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "ggaggaacuuagauucccu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1324 " record
Length: 19
GC Content:47 %
Starting position: 28493
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "ggaggaacuuagauucccu" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "ggaggaacuuagauucccu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "ggaggaacuuagauucccu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1318 " record
Length: 19
GC Content:47 %
Starting position: 28493
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "ggaggaacuuagauucccu" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gaacaaacccaaggaaauu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaacaaacccaaggaaauu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1323 " record
Length: 19
GC Content:37 %
Starting position: 28958
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gaacaaacccaaggaaauu" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gaacaaacccaaggaaauu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaacaaacccaaggaaauu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1304 " record
Length: 19
GC Content:37 %
Starting position: 28958
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gaacaaacccaaggaaauu" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gaaauucaacuccuggcag" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaaauucaacuccuggcag" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1322 " record
Length: 19
GC Content:47 %
Starting position: 28704
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gaaauucaacuccuggcag" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gcguguuaaaaaucugaac" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gcguguuaaaaaucugaac" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1306 " record
Length: 19
GC Content:37 %
Starting position: 26296
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gcguguuaaaaaucugaac" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gaaauucaacuccuggcag" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaaauucaacuccuggcag" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1315 " record
Length: 19
GC Content:47 %
Starting position: 28704
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gaaauucaacuccuggcag" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "guaaaaccaacgguuuacg" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "guaaaaccaacgguuuacg" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1305 " record
Length: 19
GC Content:42 %
Starting position: 26270
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "guaaaaccaacgguuuacg" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gcguguuaaaaaucugaac" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gcguguuaaaaaucugaac" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1320 " record
Length: 19
GC Content:37 %
Starting position: 26296
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gcguguuaaaaaucugaac" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gaacucuucugaaggaguu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaacucuucugaaggaguu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1301 " record
Length: 19
GC Content:42 %
Starting position: 26311
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gaacucuucugaaggaguu" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gcuaacaaagaaggcaucg" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gcuaacaaagaaggcaucg" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1316 " record
Length: 19
GC Content:47 %
Starting position: 28493
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gcuaacaaagaaggcaucg" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gaacucuucugaaggaguu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaacucuucugaaggaguu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1319 " record
Length: 19
GC Content:42 %
Starting position: 26311
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gaacucuucugaaggaguu" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "gcuaacaaagaaggcaucg" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gcuaacaaagaaggcaucg" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1325 " record
Length: 19
GC Content:47 %
Starting position: 28493
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "gcuaacaaagaaggcaucg" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181

siRNA sequence "guaaaaccaacgguuuacg" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "guaaaaccaacgguuuacg" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1321 " record
Length: 19
GC Content:42 %
Starting position: 26270
Transfection Reagent: Sofast
Incubation Time (Hours):24

Offtargets for "guaaaaccaacgguuuacg" siRNA in Human Genome sequences
See at Genbank
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1302	gaucuucuggucuaaacga	SARS Coronavirus	Env	COS-7	Protein	84	17139181	Blast SL	refseqs
virsi1317	gaucuucuggucuaaacga	SARS Coronavirus	Env	293T	Protein	79	17139181	Blast SL	refseqs
virsi1324	ggaggaacuuagauucccu	SARS Coronavirus	N	293T	Protein	76	17139181	Blast SL	refseqs
virsi1318	ggaggaacuuagauucccu	SARS Coronavirus	N	COS-7	Protein	72	17139181	Blast SL	refseqs
virsi1323	gaacaaacccaaggaaauu	SARS Coronavirus	N	293T	Protein	70	17139181	Blast SL	refseqs
virsi1304	gaacaaacccaaggaaauu	SARS Coronavirus	N	COS-7	Protein	65	17139181	Blast SL	refseqs
virsi1322	gaaauucaacuccuggcag	SARS Coronavirus	N	293T	Protein	45	17139181	Blast SL	refseqs
virsi1306	gcguguuaaaaaucugaac	SARS Coronavirus	Env	COS-7	Protein	35	17139181	Blast SL	refseqs
virsi1315	gaaauucaacuccuggcag	SARS Coronavirus	N	COS-7	Protein	35	17139181	Blast SL	refseqs
virsi1305	guaaaaccaacgguuuacg	SARS Coronavirus	Env	COS-7	Protein	23	17139181	Blast SL	refseqs
virsi1320	gcguguuaaaaaucugaac	SARS Coronavirus	Env	293T	Protein	15	17139181	Blast SL	refseqs
virsi1301	gaacucuucugaaggaguu	SARS Coronavirus	Env	COS-7	Protein	14	17139181	Blast SL	refseqs
virsi1316	gcuaacaaagaaggcaucg	SARS Coronavirus	N	COS-7	Protein	14	17139181	Blast SL	refseqs
virsi1319	gaacucuucugaaggaguu	SARS Coronavirus	Env	293T	Protein	12	17139181	Blast SL	refseqs
virsi1325	gcuaacaaagaaggcaucg	SARS Coronavirus	N	293T	Protein	6	17139181	Blast SL	refseqs
virsi1321	guaaaaccaacgguuuacg	SARS Coronavirus	Env	293T	Protein	2	17139181	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm