VIRsiRNAdb

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Total number of Results for 18093677 are 5
Results from 0 - 25

siRNA sequence "gcauugaacaugagcagca" alignment with "Sendai Virus" virus reference Genome sequences
siRNA sequence matching with "gcauugaacaugagcagca" Sendai Virus" Virus reference Genome sequences
Browse all the records for "Sendai Virus" virus
Browse "virsi1001 " record
Length: 19
GC Content:47 %
Starting position: 223
Strain of Virus: VR-105 Parainfluenza1 Sendai/52, Z Strain
GenBank Acc: AB005795
Transfection Reagent: Lipofectamine
Incubation Time (Hours):24

Offtargets for "gcauugaacaugagcagca" siRNA in Human Genome sequences
See AB005795 at Genbank
Pubmed:18093677
Article:Functional modification of Sendai virus by siRNA.
Authors:Saga K, Tamai K, Kawachi M, Shimbo T, Fujita H, Yamazaki T, Kaneda Y.
Journal:J Biotechnol. 2008 Feb 1;133(3):386-94.
Entrez:18093677

siRNA sequence "gaacaaaaacagcagggau" alignment with "Sendai Virus" virus reference Genome sequences
siRNA sequence matching with "gaacaaaaacagcagggau" Sendai Virus" Virus reference Genome sequences
Browse all the records for "Sendai Virus" virus
Browse "virsi1002 " record
Length: 19
GC Content:42 %
Starting position: 342
Strain of Virus: VR-105 Parainfluenza1 Sendai/52, Z Strain
GenBank Acc: AB005795
Transfection Reagent: Lipofectamine
Incubation Time (Hours):24

Offtargets for "gaacaaaaacagcagggau" siRNA in Human Genome sequences
See AB005795 at Genbank
Pubmed:18093677
Article:Functional modification of Sendai virus by siRNA.
Authors:Saga K, Tamai K, Kawachi M, Shimbo T, Fujita H, Yamazaki T, Kaneda Y.
Journal:J Biotechnol. 2008 Feb 1;133(3):386-94.
Entrez:18093677

siRNA sequence "gaacuaagucucaccggua" alignment with "Sendai Virus" virus reference Genome sequences
siRNA sequence matching with "gaacuaagucucaccggua" Sendai Virus" Virus reference Genome sequences
Browse all the records for "Sendai Virus" virus
Browse "virsi1003 " record
Length: 19
GC Content:47 %
Starting position: 899
Strain of Virus: VR-105 Parainfluenza1 Sendai/52, Z Strain
GenBank Acc: AB005795
Transfection Reagent: Lipofectamine
Incubation Time (Hours):24

Offtargets for "gaacuaagucucaccggua" siRNA in Human Genome sequences
See AB005795 at Genbank
Pubmed:18093677
Article:Functional modification of Sendai virus by siRNA.
Authors:Saga K, Tamai K, Kawachi M, Shimbo T, Fujita H, Yamazaki T, Kaneda Y.
Journal:J Biotechnol. 2008 Feb 1;133(3):386-94.
Entrez:18093677

siRNA sequence "gcgugaucauccaggucaa" alignment with "Sendai Virus" virus reference Genome sequences
siRNA sequence matching with "gcgugaucauccaggucaa" Sendai Virus" Virus reference Genome sequences
Browse all the records for "Sendai Virus" virus
Browse "virsi1004 " record
Length: 19
GC Content:53 %
Starting position: 1142
Strain of Virus: VR-105 Parainfluenza1 Sendai/52, Z Strain
GenBank Acc: AB005795
Transfection Reagent: Lipofectamine
Incubation Time (Hours):24

Offtargets for "gcgugaucauccaggucaa" siRNA in Human Genome sequences
See AB005795 at Genbank
Pubmed:18093677
Article:Functional modification of Sendai virus by siRNA.
Authors:Saga K, Tamai K, Kawachi M, Shimbo T, Fujita H, Yamazaki T, Kaneda Y.
Journal:J Biotechnol. 2008 Feb 1;133(3):386-94.
Entrez:18093677

siRNA sequence "gcguauacacugaugcuua" alignment with "Sendai Virus" virus reference Genome sequences
siRNA sequence matching with "gcguauacacugaugcuua" Sendai Virus" Virus reference Genome sequences
Browse all the records for "Sendai Virus" virus
Browse "virsi1005 " record
Length: 19
GC Content:42 %
Starting position: 1227
Strain of Virus: VR-105 Parainfluenza1 Sendai/52, Z Strain
GenBank Acc: AB005795
Transfection Reagent: Lipofectamine
Incubation Time (Hours):24

Offtargets for "gcguauacacugaugcuua" siRNA in Human Genome sequences
See AB005795 at Genbank
Pubmed:18093677
Article:Functional modification of Sendai virus by siRNA.
Authors:Saga K, Tamai K, Kawachi M, Shimbo T, Fujita H, Yamazaki T, Kaneda Y.
Journal:J Biotechnol. 2008 Feb 1;133(3):386-94.
Entrez:18093677


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1001	gcauugaacaugagcagca	Sendai Virus	HN	Monkey Kidney Cells	mRNA	Low	18093677	Blast SL	refseqs
virsi1002	gaacaaaaacagcagggau	Sendai Virus	HN	Monkey Kidney Cells	mRNA	Low	18093677	Blast SL	refseqs
virsi1003	gaacuaagucucaccggua	Sendai Virus	HN	Monkey Kidney Cells	mRNA	High	18093677	Blast SL	refseqs
virsi1004	gcgugaucauccaggucaa	Sendai Virus	HN	Monkey Kidney Cells	mRNA	80	18093677	Blast SL	refseqs
virsi1005	gcguauacacugaugcuua	Sendai Virus	HN	Monkey Kidney Cells	mRNA	80	18093677	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm