VIRsiRNAdb

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Total number of Results for 18230756 are 2
Results from 0 - 25

siRNA sequence "aagagaccuucucuguccacu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aagagaccuucucuguccacu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1883 " record
Length: 21
GC Content:48 %
Starting position: 291
Strain of Virus: EBV
GenBank Acc: NC_007605
Transfection Reagent: Oligofectamine
Incubation Time (Hours):48

Offtargets for "aagagaccuucucuguccacu" siRNA in Human Genome sequences
See NC_007605 at Genbank
Pubmed:18230756
Article:EBV LMP2A affects LMP1-mediated NF-kappaB signaling and survival of lymphoma cells by regulating TRAF2 expression.
Authors:Guasparri I, Bubman D, Cesarman E.
Journal:Blood. 2008 Apr 1;111(7):3813-20. Epub 2008 Jan 29. Erratum in: Blood. 2008 Jul 15;112(2):452.
Entrez:18230756

siRNA sequence "aacucccaauauccaucugcu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aacucccaauauccaucugcu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1884 " record
Length: 21
GC Content:43 %
Starting position: 82
Strain of Virus: EBV
GenBank Acc: X81780
Transfection Reagent: Oligofectamine

Offtargets for "aacucccaauauccaucugcu" siRNA in Human Genome sequences
See X81780 at Genbank
Pubmed:18230756
Article:EBV LMP2A affects LMP1-mediated NF-kappaB signaling and survival of lymphoma cells by regulating TRAF2 expression.
Authors:Guasparri I, Bubman D, Cesarman E.
Journal:Blood. 2008 Apr 1;111(7):3813-20. Epub 2008 Jan 29. Erratum in: Blood. 2008 Jul 15;112(2):452.
Entrez:18230756


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1883	aagagaccuucucuguccacu	Epstein-Barr Virus [EBV]	LMP1	IBL-1	Protein	75	18230756	Blast SL	refseqs
virsi1884	aacucccaauauccaucugcu	Epstein-Barr Virus [EBV]	LMP2A	IBL-1	Protein	75	18230756	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm