VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
virsi1715
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1715
aggaggaugaaauagauggu
Human Papillomavirus [HPV]
E7
CaSki
RNA
100
19174559
Blast
SL
refseqs
     
siRNA sequence "
aggaggaugaaauagauggu
" alignment with "
Human Papillomavirus [HPV]
" virus reference Genome sequences
siRNA sequence matching with "
aggaggaugaaauagauggu
"
Human Papillomavirus [HPV]
" Virus reference Genome sequences
Browse all the records for "
Human Papillomavirus [HPV]
" virus
Browse "
virsi1715
" record
Length:
20
GC Content:
40 %
Starting position:
662
Strain of Virus:
HPV16
GenBank Acc:
NC_001526
Transfection Reagent:
Lipofectamine 2000
Incubation Time (Hours):
24
Offtargets for "
aggaggaugaaauagauggu
" siRNA in Human Genome sequences
See
NC_001526
at Genbank
Pubmed:
19174559
Article:
Inhibition of cervical cancer cell growth by human papillomavirus virus-like particles packaged with human papillomavirus oncoprotein short hairpin RNAs.
Authors:
Bousarghin L, Touze A, Gaud G, Iochmann S, Alvarez E, Reverdiau P, Gaitan J, Jourdan ML, Sizaret PY, Coursaget PL.
Journal:
Mol Cancer Ther. 2009 Feb;8(2):357-65. Epub 2009 Jan 27.
Entrez:
19174559
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm