Predicted siRNAs for HIV, Influenza, HCV, HBV, SARS

VIRpred_id Sequence Virus Name Target Region Efficacy
VIRpred_id Sequence Virus Name Target Region Efficacy
VIRpred_000001catggagagcacaacatca
HBV
P
97.9
VIRpred_000002ggaacatcaactaccagca
HBV
P
94.05
VIRpred_000003aggaacatcaactaccagc
HBV
P
91.93
VIRpred_000004gaccttgaggcatacttca
HBV
P
91.9
VIRpred_000005gtgtgcacttcgcttcacc
HBV
P
91.17
VIRpred_000006ctagcagcttgttttgctc
HBV
P
89.73
VIRpred_000007gtgcacttcgcttcacctc
HBV
P
89.35
VIRpred_000008cgtttctcctggctcagtt
HBV
P
89.12
VIRpred_000009gcacttcgcttcacctctg
HBV
P
88.9
VIRpred_000010tgtgcacttcgcttcacct
HBV
P
88.87
VIRpred_000011aacatcaactaccagcacg
HBV
P
87.85
VIRpred_000012gaacatggagagcacaaca
HBV
P
86.01
VIRpred_000013tgcacttcgcttcacctct
HBV
P
85.64
VIRpred_000014gaggactcttggactctca
HBV
P
84.55
VIRpred_000015gactactgcctcacccata
HBV
P
84.44
VIRpred_000016atgcccctatcttatcaac
HBV
P
84.08
VIRpred_000017gcctcatcttcttgttggt
HBV
P
84
VIRpred_000018cgaccttgaggcatacttc
HBV
P
83.48
VIRpred_000019ccaggaacatcaactacca
HBV
P
83.35
VIRpred_000020acatcaactaccagcacgg
HBV
P
83.18
VIRpred_000021cagcatccagggaattagt
HBV
P
82.35
VIRpred_000022gcgcatgcgtggaaccttt
HBV
P
82.15
VIRpred_000023gaccgtgtgcacttcgctt
HBV
P
81.9
VIRpred_000024ctaggaggctgtaggcata
HBV
P
81.9
VIRpred_000025gaacaagagctacagcatg
HBV
P
81.89
VIRpred_000026atgcccctatcttatcaac
HBV
C
84.08
VIRpred_000027cagcatccagggaattagt
HBV
C
82.35
VIRpred_000028atttggaagacccagcatc
HBV
C
81.76
VIRpred_000029gacccagcatccagggaat
HBV
C
78.46
VIRpred_000030gttcaagcctccaagctgt
HBV
C
77.54
VIRpred_000031cggaacattgttcacctca
HBV
C
76.97
VIRpred_000032taatttggaagacccagca
HBV
C
76.85
VIRpred_000033gagtctccggaacattgtt
HBV
C
76.73
VIRpred_000034gtaatttggaagacccagc
HBV
C
75.89
VIRpred_000035aatttggaagacccagcat
HBV
C
75.04
VIRpred_000036gagcttctgtggagttact
HBV
C
74.48
VIRpred_000037gcttctgtggagttactct
HBV
C
73.64
VIRpred_000038agacccagcatccagggaa
HBV
C
73.02
VIRpred_000039cacctcaccatacagcact
HBV
C
72.78
VIRpred_000040gtagtcagctatgtcaatg
HBV
C
72.72
VIRpred_000041aagaatttggagcttctgt
HBV
C
72.58
VIRpred_000042gaatttggagcttctgtgg
HBV
C
72.54
VIRpred_000043cagcactcaggcaagctat
HBV
C
72.47
VIRpred_000044gggtgggaagtaatttgga
HBV
C
72.37
VIRpred_000045tttggagtgtggattcgca
HBV
C
72.24
VIRpred_000046ggaacattgttcacctcac
HBV
C
72.16
VIRpred_000047gcatggacattgacccgta
HBV
C
72.15
VIRpred_000048cccctatcttatcaacact
HBV
C
72.1
VIRpred_000049agtagtcagctatgtcaat
HBV
C
71.53
VIRpred_000050tgcccctatcttatcaaca
HBV
C
71.52
VIRpred_000051gaccttgaggcatacttca
HBV
X
91.9
VIRpred_000052gtgtgcacttcgcttcacc
HBV
X
91.17
VIRpred_000053gtgcacttcgcttcacctc
HBV
X
89.35
VIRpred_000054gcacttcgcttcacctctg
HBV
X
88.9
VIRpred_000055tgtgcacttcgcttcacct
HBV
X
88.87
VIRpred_000056tgcacttcgcttcacctct
HBV
X
85.64
VIRpred_000057gaggactcttggactctca
HBV
X
84.55
VIRpred_000058cgaccttgaggcatacttc
HBV
X
83.48
VIRpred_000059gaccgtgtgcacttcgctt
HBV
X
81.9
VIRpred_000060ctaggaggctgtaggcata
HBV
X
81.9
VIRpred_000061ccgtgtgcacttcgcttca
HBV
X
81.27
VIRpred_000062ctttgtactaggaggctgt
HBV
X
79.37
VIRpred_000063cacttcgcttcacctctgc
HBV
X
78.18
VIRpred_000064gttcaccagcaccatgcaa
HBV
X
77.27
VIRpred_000065cgaccgaccttgaggcata
HBV
X
77.1
VIRpred_000066gcaatgtcaacgaccgacc
HBV
X
76.9
VIRpred_000067acttcgcttcacctctgca
HBV
X
75.06
VIRpred_000068cccgtctgtgccttctcat
HBV
X
74.9
VIRpred_000069attggtctgttcaccagca
HBV
X
74.9
VIRpred_000070gcttcacctctgcacgtag
HBV
X
74.66
VIRpred_000071ttcaccagcaccatgcaac
HBV
X
73.99
VIRpred_000072ggaccgtgtgcacttcgct
HBV
X
73.98
VIRpred_000073ttcgcttcacctctgcacg
HBV
X
73.7
VIRpred_000074ttcacctctgcacgtagca
HBV
X
73.55
VIRpred_000075cagcaatgtcaacgaccga
HBV
X
73.01
VIRpred_000076catggagagcacaacatca
HBV
S
97.9
VIRpred_000077ggaacatcaactaccagca
HBV
S
94.05
VIRpred_000078aggaacatcaactaccagc
HBV
S
91.93
VIRpred_000079gaccttgaggcatacttca
HBV
S
91.9
VIRpred_000080gtgtgcacttcgcttcacc
HBV
S
91.17
VIRpred_000081ctagcagcttgttttgctc
HBV
S
89.73
VIRpred_000082gtgcacttcgcttcacctc
HBV
S
89.35
VIRpred_000083cgtttctcctggctcagtt
HBV
S
89.12
VIRpred_000084gcacttcgcttcacctctg
HBV
S
88.9
VIRpred_000085tgtgcacttcgcttcacct
HBV
S
88.87
VIRpred_000086aacatcaactaccagcacg
HBV
S
87.85
VIRpred_000087gaacatggagagcacaaca
HBV
S
86.01
VIRpred_000088tgcacttcgcttcacctct
HBV
S
85.64
VIRpred_000089gaggactcttggactctca
HBV
S
84.55
VIRpred_000090gactactgcctcacccata
HBV
S
84.44
VIRpred_000091atgcccctatcttatcaac
HBV
S
84.08
VIRpred_000092gcctcatcttcttgttggt
HBV
S
84
VIRpred_000093cgaccttgaggcatacttc
HBV
S
83.48
VIRpred_000094ccaggaacatcaactacca
HBV
S
83.35
VIRpred_000095acatcaactaccagcacgg
HBV
S
83.18
VIRpred_000096cagcatccagggaattagt
HBV
S
82.35
VIRpred_000097gcgcatgcgtggaaccttt
HBV
S
82.15
VIRpred_000098gaccgtgtgcacttcgctt
HBV
S
81.9
VIRpred_000099ctaggaggctgtaggcata
HBV
S
81.9
VIRpred_000100gaacaagagctacagcatg
HBV
S
81.89
VIRpred_000101gggcatgttcaacatgcta
INFLU
PB1
88.94
VIRpred_000102gatgaacagatgtaccaga
INFLU
PB1
88.1
VIRpred_000103gaacagatgtaccagaagt
INFLU
PB1
87.43
VIRpred_000104gatctgttccaccattgaa
INFLU
PB1
86.42
VIRpred_000105gaaccaagtgggtatgcac
INFLU
PB1
83.93
VIRpred_000106gcattgacctgaagtactt
INFLU
PB1
83.79
VIRpred_000107gtaccagaagtgctgcaat
INFLU
PB1
83.17
VIRpred_000108acacctgggatgcagatta
INFLU
PB1
83.14
VIRpred_000109ggtacatgttcgagagtaa
INFLU
PB1
82.9
VIRpred_000110cctccatacagccatggaa
INFLU
PB1
82.09
VIRpred_000111caaaccatgagggaataca
INFLU
PB1
82.04
VIRpred_000112ctagcaagcattgacctga
INFLU
PB1
82
VIRpred_000113catggagctacccagcttt
INFLU
PB1
81.88
VIRpred_000114ggcatgttcaacatgctaa
INFLU
PB1
81.75
VIRpred_000115agatgtaccagaagtgctg
INFLU
PB1
81.75
VIRpred_000116cgaatggcctaacagctaa
INFLU
PB1
81.63
VIRpred_000117gttccaccattgaagaact
INFLU
PB1
81.39
VIRpred_000118tccaccattgaagaactca
INFLU
PB1
80.46
VIRpred_000119cagatgtaccagaagtgct
INFLU
PB1
80.15
VIRpred_000120aagcaggagtggacagatt
INFLU
PB1
79.67
VIRpred_000121gagaattcatgccttgaaa
INFLU
PB1
79.61
VIRpred_000122gagtctggacggatcaaga
INFLU
PB1
79.6
VIRpred_000123cctgagcatggcacccata
INFLU
PB1
79.46
VIRpred_000124cagccatggaacaggaaca
INFLU
PB1
79.08
VIRpred_000125ccaccattgaagaactcag
INFLU
PB1
78.93
VIRpred_000126ggcccagcattaagcatca
INFLU
PB2
88.93
VIRpred_000127ggagcagatgtacactcca
INFLU
PB2
88.15
VIRpred_000128gaatgtgagaggatcaggg
INFLU
PB2
87.59
VIRpred_000129gtggatgatggcaatgaga
INFLU
PB2
86.71
VIRpred_000130tgtgaatgtgagaggatca
INFLU
PB2
86.3
VIRpred_000131cagcagacccattagcatc
INFLU
PB2
85.37
VIRpred_000132gtagatgaatactccagca
INFLU
PB2
84.29
VIRpred_000133cccagcattaagcatcaat
INFLU
PB2
83.97
VIRpred_000134ccagcattaagcatcaatg
INFLU
PB2
82.63
VIRpred_000135ctgtgaatgtgagaggatc
INFLU
PB2
82.42
VIRpred_000136cgtgctgggagcagatgta
INFLU
PB2
82.27
VIRpred_000137agacgagcagtcaattgct
INFLU
PB2
81.57
VIRpred_000138ggaggcacaggatgtgatt
INFLU
PB2
81.08
VIRpred_000139ggaacaagccgtagacata
INFLU
PB2
80.9
VIRpred_000140cagcattaagcatcaatga
INFLU
PB2
80.68
VIRpred_000141agagatatggcccagcatt
INFLU
PB2
80.4
VIRpred_000142gttgaaacatggtaccttc
INFLU
PB2
79.92
VIRpred_000143aagaagagcagcagtgtca
INFLU
PB2
79.82
VIRpred_000144agagcaacagctattctca
INFLU
PB2
79.77
VIRpred_000145atgaacaaggacaaaccct
INFLU
PB2
79.44
VIRpred_000146gagcagatgtacactccag
INFLU
PB2
79.4
VIRpred_000147ggagtagatgaatactcca
INFLU
PB2
79.26
VIRpred_000148ggagagacgagcagtcaat
INFLU
PB2
79.25
VIRpred_000149gaacagagtaggatgcaat
INFLU
PB2
79.17
VIRpred_000150gcaaaatgggagtagatga
INFLU
PB2
79.02
VIRpred_000151atccctgggttttgcttaa
INFLU
PA
97.9
VIRpred_000152ccctgggttttgcttaatg
INFLU
PA
97.46
VIRpred_000153gatccctgggttttgctta
INFLU
PA
95.9
VIRpred_000154tccctgggttttgcttaat
INFLU
PA
94.9
VIRpred_000155gagcctatgtagatggatt
INFLU
PA
90.82
VIRpred_000156cagcagattgagagcatga
INFLU
PA
89.77
VIRpred_000157tcagcagattgagagcatg
INFLU
PA
89.22
VIRpred_000158aatggaacctccaagatca
INFLU
PA
89.15
VIRpred_000159atatgtgagaaccaatgga
INFLU
PA
85.19
VIRpred_000160agagcctatgtagatggat
INFLU
PA
84.74
VIRpred_000161agatgttggagaccttaaa
INFLU
PA
83.45
VIRpred_000162aaagatgttggagacctta
INFLU
PA
83.01
VIRpred_000163caaagatgttggagacctt
INFLU
PA
83
VIRpred_000164gtagttgtggcaatgctac
INFLU
PA
83
VIRpred_000165gaggcgaagagacaattga
INFLU
PA
82.43
VIRpred_000166aagagaacaagccaattga
INFLU
PA
80.01
VIRpred_000167gaacatatcgcaagcatga
INFLU
PA
79.48
VIRpred_000168agaaccaatggaacctcca
INFLU
PA
79.39
VIRpred_000169gaaccaatggaacctccaa
INFLU
PA
79.23
VIRpred_000170agtagttgtggcaatgcta
INFLU
PA
78.81
VIRpred_000171acgccaaaattgaaccatt
INFLU
PA
78.34
VIRpred_000172agagcctaacatagtcaaa
INFLU
PA
77.64
VIRpred_000173gcttctcattgttcaggca
INFLU
PA
77.36
VIRpred_000174gacccgaatgcactattga
INFLU
PA
77.33
VIRpred_000175tatgtgagaaccaatggaa
INFLU
PA
77.16
VIRpred_000176ggatgtgctctaatgggtc
INFLU
HA
90.53
VIRpred_000177gtgcatggaaagtgtcaaa
INFLU
HA
83.56
VIRpred_000178cagaatgccattgacgaga
INFLU
HA
83.12
VIRpred_000179gagagcaattgagctcagt
INFLU
HA
82.77
VIRpred_000180gaatgccattgacgagatt
INFLU
HA
79.97
VIRpred_000181gggtctctacagtgtagaa
INFLU
HA
79.9
VIRpred_000182gagcaattgagctcagtgt
INFLU
HA
79.77
VIRpred_000183acaggattgaggaatgtcc
INFLU
HA
79.69
VIRpred_000184acaccagcctcccatttca
INFLU
HA
79.56
VIRpred_000185gcaattgagctcagtgtca
INFLU
HA
79.02
VIRpred_000186ctatcagaatgcagatgca
INFLU
HA
78.35
VIRpred_000187acgtgcatggaaagtgtca
INFLU
HA
77.06
VIRpred_000188agagcaattgagctcagtg
INFLU
HA
77.02
VIRpred_000189gacccaaagtgagggatca
INFLU
HA
76.9
VIRpred_000190gtagatggatggtacggtt
INFLU
HA
76.68
VIRpred_000191cagcaagctcatggtccta
INFLU
HA
76.26
VIRpred_000192ggtggacagggatggtaga
INFLU
HA
75.76
VIRpred_000193tgggtctctacagtgtaga
INFLU
HA
75.5
VIRpred_000194gatgtgctctaatgggtct
INFLU
HA
75.48
VIRpred_000195ggatggtagatggatggta
INFLU
HA
75.42
VIRpred_000196gacagggatggtagatgga
INFLU
HA
74.8
VIRpred_000197tatgcagccgacctgaaga
INFLU
HA
74.79
VIRpred_000198gcaagctcatggtcctaca
INFLU
HA
74.61
VIRpred_000199ccaaagtgagggatcaaga
INFLU
HA
74.34
VIRpred_000200aagagagcaattgagctca
INFLU
HA
74.22
VIRpred_000201tgtgcagcctacattctca
INFLU
NP
90.77
VIRpred_000202tgagaatgtggaaaccatg
INFLU
NP
90.2
VIRpred_000203agagtcaattggtgtggat
INFLU
NP
88.82
VIRpred_000204atgagaatgtggaaaccat
INFLU
NP
88.19
VIRpred_000205ggtcttatttcttcggaga
INFLU
NP
86.62
VIRpred_000206tacctagaagagcatccca
INFLU
NP
86.22
VIRpred_000207gcaccaaacgatcatatga
INFLU
NP
83.67
VIRpred_000208gaatgtggaaaccatggac
INFLU
NP
83.36
VIRpred_000209gggtcttatttcttcggag
INFLU
NP
82.82
VIRpred_000210gaaaggagttggaacaata
INFLU
NP
81.9
VIRpred_000211gagtcttcgagctctcgga
INFLU
NP
81.87
VIRpred_000212gatggaaagtgcaaagcca
INFLU
NP
81.49
VIRpred_000213gtatgggcttgcagtagca
INFLU
NP
80.91
VIRpred_000214atttggcattccaacctga
INFLU
NP
80.74
VIRpred_000215aatggatcccagaatgtgc
INFLU
NP
80.65
VIRpred_000216aatgcagaggagtatgaca
INFLU
NP
79.97
VIRpred_000217gagaatgtggaaaccatgg
INFLU
NP
79.77
VIRpred_000218agaatgtggaaaccatgga
INFLU
NP
79.42
VIRpred_000219gggtccagattgcttcaaa
INFLU
NP
79.27
VIRpred_000220ccagctcacaagagtcaat
INFLU
NP
79.04
VIRpred_000221caataccctggaactaaga
INFLU
NP
78.62
VIRpred_000222gtgcaaagccagaagattt
INFLU
NP
78.57
VIRpred_000223gagtcaattggtgtggatg
INFLU
NP
78.54
VIRpred_000224aagtggatgagagaactca
INFLU
NP
78.51
VIRpred_000225gcagcattcagcgggaaca
INFLU
NP
78.48
VIRpred_000226gaccttgcttctgggttga
INFLU
NA
88.37
VIRpred_000227gcttctgggttgaactaat
INFLU
NA
83.39
VIRpred_000228cttggaatgcagaaccttc
INFLU
NA
82.98
VIRpred_000229ggtcagcaagtgcttgtca
INFLU
NA
81.42
VIRpred_000230ggattagccactcaattca
INFLU
NA
81.29
VIRpred_000231gcttggtcagcaagtgctt
INFLU
NA
80.76
VIRpred_000232aatggtgtttggataggga
INFLU
NA
80.3
VIRpred_000233tgttcagcatccagaacta
INFLU
NA
80.06
VIRpred_000234tcagcatccagaactaaca
INFLU
NA
79.55
VIRpred_000235gcccctaattatcactatg
INFLU
NA
79.42
VIRpred_000236acaagagtctgaatgtgca
INFLU
NA
79.19
VIRpred_000237gttttgttcagcatccaga
INFLU
NA
79
VIRpred_000238caagagtctgaatgtgcat
INFLU
NA
78.6
VIRpred_000239gcgggagttttgttcagca
INFLU
NA
78.54
VIRpred_000240gtggctgtgttaaagtaca
INFLU
NA
77.51
VIRpred_000241ccttggaatgcagaacctt
INFLU
NA
77.21
VIRpred_000242agaccttgcttctgggttg
INFLU
NA
76.17
VIRpred_000243gggagttttgttcagcatc
INFLU
NA
75.68
VIRpred_000244gacccaaagagaacacaat
INFLU
NA
75.2
VIRpred_000245ggaatttctggcccagaca
INFLU
NA
75
VIRpred_000246ggtgctgagttgccattta
INFLU
NA
74.99
VIRpred_000247gcagttgtggtccagtatc
INFLU
NA
74.58
VIRpred_000248gttaacatcagcaacacca
INFLU
NA
74.26
VIRpred_000249gatggcatcaattggctaa
INFLU
NA
74.25
VIRpred_000250gagcccatatcgaacccta
INFLU
NA
74.24
VIRpred_000251gaatgggagtgcagatgca
INFLU
MP
100
VIRpred_000252aagcgaatgggagtgcaga
INFLU
MP
93.35
VIRpred_000253acagcagagtgctgtggat
INFLU
MP
90.22
VIRpred_000254gagtgcagatgcagcgatt
INFLU
MP
89.16
VIRpred_000255agagtgctgtggatgttga
INFLU
MP
89.16
VIRpred_000256gatggtacatgcaatgaga
INFLU
MP
88.64
VIRpred_000257agaagcgaatgggagtgca
INFLU
MP
88.64
VIRpred_000258agcagagtgctgtggatgt
INFLU
MP
87.84
VIRpred_000259gcagatgcagcgattcaag
INFLU
MP
86.82
VIRpred_000260cagcagagtgctgtggatg
INFLU
MP
85.89
VIRpred_000261cgaatgggagtgcagatgc
INFLU
MP
85.54
VIRpred_000262cagagtgctgtggatgttg
INFLU
MP
85.49
VIRpred_000263gcagagtgctgtggatgtt
INFLU
MP
85.09
VIRpred_000264atgggagtgcagatgcagc
INFLU
MP
84.17
VIRpred_000265agcgaatgggagtgcagat
INFLU
MP
83.32
VIRpred_000266gaacaacatggatagagca
INFLU
MP
83.01
VIRpred_000267gagtgctgtggatgttgac
INFLU
MP
82.82
VIRpred_000268ttgtcaacatagagctaga
INFLU
MP
82.75
VIRpred_000269gcgaatgggagtgcagatg
INFLU
MP
82.73
VIRpred_000270gatgcagcgattcaagtga
INFLU
MP
82.68
VIRpred_000271gagtccatgagggaagaat
INFLU
MP
81.72
VIRpred_000272gaagcgaatgggagtgcag
INFLU
MP
81.61
VIRpred_000273ctaccagaagcgaatggga
INFLU
MP
81.52
VIRpred_000274agtccatgagggaagaata
INFLU
MP
80.32
VIRpred_000275aatttgcaggcctaccaga
INFLU
MP
79.37
VIRpred_000276gaccttcactacctccaga
INFLU
NS
87.6
VIRpred_000277ggacttgaatggaatggta
INFLU
NS
85.4
VIRpred_000278ctacctccagagcagaaat
INFLU
NS
81.64
VIRpred_000279gagaccttcactacctcca
INFLU
NS
81.01
VIRpred_000280cttcactacctccagagca
INFLU
NS
80.62
VIRpred_000281atgcaagccttacaactac
INFLU
NS
79.02
VIRpred_000282gagagcaattgggacagaa
INFLU
NS
78.14
VIRpred_000283agaccttcactacctccag
INFLU
NS
77.39
VIRpred_000284tgagaataggagaccttca
INFLU
NS
77.36
VIRpred_000285gagaccttgatactactaa
INFLU
NS
77.22
VIRpred_000286agagcaattgggacagaaa
INFLU
NS
77.12
VIRpred_000287gagctttctcgtttcagct
INFLU
NS
76.95
VIRpred_000288ctgtgatgagaataggaga
INFLU
NS
76.58
VIRpred_000289caagcgatttgcagacaat
INFLU
NS
75.24
VIRpred_000290tcactacctccagagcaga
INFLU
NS
74.85
VIRpred_000291gctttctcgtttcagctta
INFLU
NS
74.79
VIRpred_000292gtggcgagagcaattggga
INFLU
NS
74.78
VIRpred_000293ttcactacctccagagcag
INFLU
NS
74.62
VIRpred_000294ggagaccttcactacctcc
INFLU
NS
74.45
VIRpred_000295acatagtactgaaagcgaa
INFLU
NS
74.23
VIRpred_000296taggagaccttcactacct
INFLU
NS
74.06
VIRpred_000297aactgtgatgagaatagga
INFLU
NS
74.02
VIRpred_000298gaataggagaccttcacta
INFLU
NS
73.88
VIRpred_000299cactacctccagagcagaa
INFLU
NS
73.68
VIRpred_000300aactactgcttgaagtaga
INFLU
NS
73.55
VIRpred_000301gcatgtggtggcttcagta
HCV
Polyprotein
93.79
VIRpred_000302gaacctagagacaaccatg
HCV
Polyprotein
93.37
VIRpred_000303ggaccagatgtggaagtgt
HCV
Polyprotein
90.57
VIRpred_000304cgatgagatggaagagtgc
HCV
Polyprotein
89.62
VIRpred_000305gaccagatgtggaagtgtt
HCV
Polyprotein
88.55
VIRpred_000306gagctcttgtagcattcaa
HCV
Polyprotein
88.44
VIRpred_000307acctccaccagaacattgt
HCV
Polyprotein
87.4
VIRpred_000308gtacctggatgaactcaac
HCV
Polyprotein
87.07
VIRpred_000309gctactccatagaaccact
HCV
Polyprotein
86.93
VIRpred_000310ggatcagcttgaacaggct
HCV
Polyprotein
86.46
VIRpred_000311ccatatgtggcaagtacct
HCV
Polyprotein
86.34
VIRpred_000312aggaacatgtggagtggga
HCV
Polyprotein
85.91
VIRpred_000313atatgtggcaagtacctct
HCV
Polyprotein
85.41
VIRpred_000314gagcccttgtagtcggtgt
HCV
Polyprotein
84.7
VIRpred_000315gggcttgttggtctcctta
HCV
Polyprotein
84.18
VIRpred_000316ccacctccaccagaacatt
HCV
Polyprotein
84.03
VIRpred_000317ggacgtgcagtacttgtac
HCV
Polyprotein
83.82
VIRpred_000318cacctccaccagaacattg
HCV
Polyprotein
83.69
VIRpred_000319tatgcaacagggaaccttc
HCV
Polyprotein
83.03
VIRpred_000320cgtgggaccagatgtggaa
HCV
Polyprotein
82.98
VIRpred_000321aggagttcgatgagatgga
HCV
Polyprotein
82.83
VIRpred_000322gtgtggtctgcgcagcaat
HCV
Polyprotein
82.72
VIRpred_000323agtcaggatgtacgtggga
HCV
Polyprotein
82.58
VIRpred_000324gtagcattcaagatcatga
HCV
Polyprotein
82.3
VIRpred_000325tgaccagagtagaagcgca
HCV
Polyprotein
81.9
VIRpred_000326gcacgaatcctaaacctca
HCV
F
78.62
VIRpred_000327gagcacgaatcctaaacct
HCV
F
74.71
VIRpred_000328cgacctcatggggtacata
HCV
F
72.99
VIRpred_000329ggtcgcgcaatttgggtaa
HCV
F
70.68
VIRpred_000330acctcaaagaaaaaccaaa
HCV
F
69.9
VIRpred_000331acaccaaccgtcgcccaca
HCV
F
64.99
VIRpred_000332aaacctcaaagaaaaacca
HCV
F
64.66
VIRpred_000333ggagtttacttgttgccgc
HCV
F
64.65
VIRpred_000334aacctcaaagaaaaaccaa
HCV
F
64.43
VIRpred_000335aggtcgcgcaatttgggta
HCV
F
64.16
VIRpred_000336cggtcagatcgttggtgga
HCV
F
63.8
VIRpred_000337gtcagatcgttggtggagt
HCV
F
63.55
VIRpred_000338gcaacctcgaggtagacgt
HCV
F
63.51
VIRpred_000339gtcgcaacctcgaggtaga
HCV
F
62.96
VIRpred_000340gcgcaatttgggtaaggtc
HCV
F
62.62
VIRpred_000341cacgaatcctaaacctcaa
HCV
F
62.51
VIRpred_000342agcacgaatcctaaacctc
HCV
F
62.42
VIRpred_000343gaatcctaaacctcaaaga
HCV
F
62.16
VIRpred_000344acctcatggggtacatacc
HCV
F
61.99
VIRpred_000345cgcaatttgggtaaggtca
HCV
F
61.7
VIRpred_000346tgagcacgaatcctaaacc
HCV
F
61.18
VIRpred_000347ggtggagtttacttgttgc
HCV
F
60.68
VIRpred_000348acgtcagcctatccccaag
HCV
F
60.57
VIRpred_000349gcggcttcgccgacctcat
HCV
F
60.56
VIRpred_000350tcagatcgttggtggagtt
HCV
F
60.25
VIRpred_000351gggccatgcaagaatgtca
HIV
ENV
92.53
VIRpred_000352tgaaccattaggagtggca
HIV
ENV
88.65
VIRpred_000353agagatggtggacctgaga
HIV
ENV
88.25
VIRpred_000354acatggtagagcagatgca
HIV
ENV
87.52
VIRpred_000355cagaggaattggcagcatt
HIV
ENV
86.84
VIRpred_000356atggtagagcagatgcata
HIV
ENV
85.38
VIRpred_000357agaggaattggcagcattt
HIV
ENV
84.9
VIRpred_000358catggtagagcagatgcat
HIV
ENV
84.89
VIRpred_000359atgcaagaatgtcagcaca
HIV
ENV
82
VIRpred_000360ggatgaggatttcaatgga
HIV
ENV
81.86
VIRpred_000361ccatgcaagaatgtcagca
HIV
ENV
81.4
VIRpred_000362ggacgagcattctatgcaa
HIV
ENV
81.21
VIRpred_000363caagagatggtggacctga
HIV
ENV
79.99
VIRpred_000364agagcagatgcatacagat
HIV
ENV
79.75
VIRpred_000365tagagcagatgcatacaga
HIV
ENV
78.67
VIRpred_000366gagcattctatgcaacagg
HIV
ENV
78.53
VIRpred_000367ccctattttgtgcatcaga
HIV
ENV
77.25
VIRpred_000368gtatcaactcaactgctgt
HIV
ENV
77.21
VIRpred_000369gatgaggatttcaatggaa
HIV
ENV
76.93
VIRpred_000370accaaagcctacaaccatg
HIV
ENV
76.81
VIRpred_000371ttgtaatacctcagccatt
HIV
ENV
76.18
VIRpred_000372ggccatgcaagaatgtcag
HIV
ENV
75.64
VIRpred_000373ggtagagcagatgcataca
HIV
ENV
75.6
VIRpred_000374aatgtggcaaagagtagga
HIV
ENV
75.6
VIRpred_000375gcatcagatgctaaagcat
HIV
ENV
75.39
VIRpred_000376gagccaccccacaagattt
HIV
GAG
95.8
VIRpred_000377gtatagccctaccagcatt
HIV
GAG
94.48
VIRpred_000378gaaccaaggggaagtgaca
HIV
GAG
91.9
VIRpred_000379catcaagcagccatgcaaa
HIV
GAG
88.26
VIRpred_000380taccctatagtgcagaaca
HIV
GAG
87.95
VIRpred_000381gattgtactgagagacagg
HIV
GAG
87.35
VIRpred_000382gaatgggatagagtgcatc
HIV
GAG
86.09
VIRpred_000383atgcgaacccagattgtaa
HIV
GAG
85.73
VIRpred_000384ctgagagacaggctaattt
HIV
GAG
85.57
VIRpred_000385agccaccccacaagattta
HIV
GAG
85.2
VIRpred_000386cagaatgggatagagtgca
HIV
GAG
85.2
VIRpred_000387acatcaagcagccatgcaa
HIV
GAG
83.97
VIRpred_000388ggagccaccccacaagatt
HIV
GAG
83.84
VIRpred_000389caagcagccatgcaaatgt
HIV
GAG
83.26
VIRpred_000390caggctaattttttaggga
HIV
GAG
82.9
VIRpred_000391accctatagtgcagaacat
HIV
GAG
81.58
VIRpred_000392gatgcagagaggcaatttt
HIV
GAG
81.26
VIRpred_000393ccctatagtgcagaacatc
HIV
GAG
79.87
VIRpred_000394agcatgtcagggagtagga
HIV
GAG
79.56
VIRpred_000395gaagcaatgagccaagtaa
HIV
GAG
79.52
VIRpred_000396gaatgtatagccctaccag
HIV
GAG
78.91
VIRpred_000397gaattttcttcagagcaga
HIV
GAG
78.61
VIRpred_000398gaacccagattgtaagact
HIV
GAG
78.55
VIRpred_000399ggatgacagaaaccttgtt
HIV
GAG
78.41
VIRpred_000400atgtcagggagtaggagga
HIV
GAG
78.4
VIRpred_000401gtgaaggggcagtagtaat
HIV
POL
99.9
VIRpred_000402gaagaaatgatgacagcat
HIV
POL
96.9
VIRpred_000403acaggagcagatgatacag
HIV
POL
95.9
VIRpred_000404tgagacaccagggattaga
HIV
POL
95.9
VIRpred_000405gagccaccccacaagattt
HIV
POL
95.8
VIRpred_000406attggaggaaatgaacaag
HIV
POL
94.9
VIRpred_000407gagatcaggctgaacatct
HIV
POL
94.9
VIRpred_000408aggtgaaggggcagtagta
HIV
POL
92.9
VIRpred_000409gaaccaaggggaagtgaca
HIV
POL
91.9
VIRpred_000410cagtgcaggggaaagaata
HIV
POL
91.9
VIRpred_000411gattgtactgagagacagg
HIV
POL
90.9
VIRpred_000412ctgagagacaggctaattt
HIV
POL
90.9
VIRpred_000413gacagtactaaatggagaa
HIV
POL
89.9
VIRpred_000414caggagcagatgatacagt
HIV
POL
85.9
VIRpred_000415agccaccccacaagattta
HIV
POL
85.2
VIRpred_000416caggctaattttttaggga
HIV
POL
82.9
VIRpred_000417ggagagcaatggctagtga
HIV
POL
77.9
VIRpred_000418tagcaggaagatggccagt
HIV
POL
77.9
VIRpred_000419aggctaattttttagggaa
HIV
POL
76.9
VIRpred_000420aaggtgaaggggcagtagt
HIV
POL
75.9
VIRpred_000421tacagtgcaggggaaagaa
HIV
POL
73.9
VIRpred_000422ggagccaccccacaagatt
HIV
POL
70.06
VIRpred_000423gaatgggatagagtgcatc
HIV
POL
68.42
VIRpred_000424gccaccccacaagatttaa
HIV
POL
68.17
VIRpred_000425ggcccaagatgaacatgag
HIV
POL
66.53
VIRpred_000426ctgcttgtaccaattgcta
HIV
TAT
96.9
VIRpred_000427gaagcggagacagcgacga
HIV
TAT
94.9
VIRpred_000428tatggcaggaagaagcgga
HIV
TAT
93.9
VIRpred_000429atggcaggaagaagcggag
HIV
TAT
93.9
VIRpred_000430ctagagccctggaagcatc
HIV
TAT
89.9
VIRpred_000431aagaatccgtatccagaga
HIV
TAT
87.9
VIRpred_000432catgtggcagaaagtagga
HIV
TAT
72.02
VIRpred_000433gaagacagtggcaatgaga
HIV
TAT
65.45
VIRpred_000434actgcttgtaccaattgct
HIV
TAT
63.56
VIRpred_000435tggcaggaagaagcggaga
HIV
TAT
63.48
VIRpred_000436actagagccctggaagcat
HIV
TAT
63.36
VIRpred_000437tggcaatgagagtgaagga
HIV
TAT
62.25
VIRpred_000438aagagcagtgggaatagga
HIV
TAT
62.14
VIRpred_000439tgcttgtaccaattgctat
HIV
TAT
61.24
VIRpred_000440tgaaccattaggagtagca
HIV
TAT
60.71
VIRpred_000441tgatctgtagtgctacaga
HIV
TAT
60.45
VIRpred_000442acatggtagaacagatgca
HIV
TAT
60.33
VIRpred_000443gaacaggaccatgtacaaa
HIV
TAT
60.18
VIRpred_000444gtggcaatgagagtgaagg
HIV
TAT
60.17
VIRpred_000445atatcagcacttgtggaga
HIV
TAT
59.95
VIRpred_000446gtagaacagatgcatgagg
HIV
TAT
59.5
VIRpred_000447atggagccagtagatccta
HIV
TAT
59.48
VIRpred_000448gcatctgttgcaactcaca
HIV
TAT
59.44
VIRpred_000449cagcagaacaatttgctga
HIV
TAT
59.36
VIRpred_000450acatgtggcagaaagtagg
HIV
TAT
59.33
VIRpred_000451gaagacagtggcaatgaga
HIV
REV
91.49
VIRpred_000452gtacatgtaatgcaaccta
HIV
REV
88.4
VIRpred_000453agagatggtggtaatagca
HIV
REV
86.89
VIRpred_000454gcctgtgcctcttcagcta
HIV
REV
85.86
VIRpred_000455gagccaattcccatacatt
HIV
REV
83.79
VIRpred_000456ggatggagtgggacagaga
HIV
REV
83.66
VIRpred_000457aagagcagtgggaatagga
HIV
REV
82.84
VIRpred_000458gctgtgccttggaatgcta
HIV
REV
82.45
VIRpred_000459catgtggcagaaagtagga
HIV
REV
81.81
VIRpred_000460accccaacccacaagaagt
HIV
REV
81.52
VIRpred_000461caatggaacaggaccatgt
HIV
REV
80.95
VIRpred_000462gaagagtggtgcagagaga
HIV
REV
80.7
VIRpred_000463tgaaccattaggagtagca
HIV
REV
80.58
VIRpred_000464tgatctgtagtgctacaga
HIV
REV
80.39
VIRpred_000465attgaggcgcaacagcatc
HIV
REV
80.24
VIRpred_000466gaacaggaccatgtacaaa
HIV
REV
79.88
VIRpred_000467caccctcccatgcagaata
HIV
REV
79.68
VIRpred_000468gtgcctcttcagctaccac
HIV
REV
79.63
VIRpred_000469acatggtagaacagatgca
HIV
REV
79.51
VIRpred_000470gacaagttgtaacacctca
HIV
REV
79.15
VIRpred_000471cagcagaacaatttgctga
HIV
REV
78.87
VIRpred_000472tgtgcctcttcagctacca
HIV
REV
78.75
VIRpred_000473tggtagaacagatgcatga
HIV
REV
78.7
VIRpred_000474gcatctgttgcaactcaca
HIV
REV
78.69
VIRpred_000475agtggcaatgagagtgaag
HIV
REV
78.55
VIRpred_000476cttggcactagcagcatta
HIV
VIF
95.8
VIRpred_000477gttcagaagtacacatccc
HIV
VIF
94.9
VIRpred_000478agcacacaagtagaccctg
HIV
VIF
94.9
VIRpred_000479gcacacaagtagaccctga
HIV
VIF
72.47
VIRpred_000480atagcacacaagtagaccc
HIV
VIF
64.84
VIRpred_000481tagcacacaagtagaccct
HIV
VIF
64.72
VIRpred_000482acttggcactagcagcatt
HIV
VIF
64.24
VIRpred_000483cacacaagtagaccctgaa
HIV
VIF
64.02
VIRpred_000484ttggcactagcagcattaa
HIV
VIF
63.81
VIRpred_000485gattgtgtggcaagtagac
HIV
VIF
63.75
VIRpred_000486ttcagaagtacacatccca
HIV
VIF
62.86
VIRpred_000487gtggcaagtagacaggatg
HIV
VIF
62.74
VIRpred_000488tcagaagtacacatcccac
HIV
VIF
62.35
VIRpred_000489ggagtctccatagaatgga
HIV
VIF
61.36
VIRpred_000490cagaagtacacatcccact
HIV
VIF
61.34
VIRpred_000491atagatggaacaagcccca
HIV
VIF
61.17
VIRpred_000492ggcactagcagcattaata
HIV
VIF
61.15
VIRpred_000493gaagtacacatcccactag
HIV
VIF
60.62
VIRpred_000494gagtctccatagaatggag
HIV
VIF
60.52
VIRpred_000495gccctaggtgtgaatatca
HIV
VIF
60.48
VIRpred_000496tggcactagcagcattaat
HIV
VIF
60.44
VIRpred_000497tggcaagtagacaggatga
HIV
VIF
60.34
VIRpred_000498gtctccatagaatggagga
HIV
VIF
60.2
VIRpred_000499agaagtacacatcccacta
HIV
VIF
59.65
VIRpred_000500agtagaccctgaactagca
HIV
VIF
59.63
VIRpred_000501gtgcctggctagaagcaca
HIV
NEF
99.9
VIRpred_000502aagaaaaggggggactgga
HIV
NEF
97.9
VIRpred_000503gggactggaagggctaatt
HIV
NEF
87.9
VIRpred_000504catggagcaatcacaagta
HIV
NEF
69.9
VIRpred_000505cctgattagcagaactaca
HIV
NEF
65.22
VIRpred_000506agagaacaccagcttgtta
HIV
NEF
62.49
VIRpred_000507gagaacaccagcttgttac
HIV
NEF
61.94
VIRpred_000508ttgtgcctggctagaagca
HIV
NEF
60.38
VIRpred_000509gctacttccctgattagca
HIV
NEF
60.11
VIRpred_000510gcttgtgcctggctagaag
HIV
NEF
59.83
VIRpred_000511ggactggaagggctaattc
HIV
NEF
59.48
VIRpred_000512agaaaaggggggactggaa
HIV
NEF
59.43
VIRpred_000513agaacaccagcttgttaca
HIV
NEF
59.39
VIRpred_000514aaggcagctgtagatctta
HIV
NEF
59.37
VIRpred_000515ttccctgattagcagaact
HIV
NEF
59.25
VIRpred_000516gtaccagttgagccagata
HIV
NEF
59.23
VIRpred_000517gcagctgtagatcttagcc
HIV
NEF
58.83
VIRpred_000518ctgcatccggagtacttca
HIV
NEF
58.74
VIRpred_000519gcagctaccaatgctgctt
HIV
NEF
58.67
VIRpred_000520gctgtagatcttagccact
HIV
NEF
58.66
VIRpred_000521acatggagcaatcacaagt
HIV
NEF
58.59
VIRpred_000522tgtgcctggctagaagcac
HIV
NEF
58.2
VIRpred_000523cttacaaggcagctgtaga
HIV
NEF
58.2
VIRpred_000524tggagcaatcacaagtagc
HIV
NEF
58.12
VIRpred_000525caaggcagctgtagatctt
HIV
NEF
58.12
VIRpred_000526ggcaggagtggaagccata
HIV
VPR
62.5
VIRpred_000527gcaggagtggaagccataa
HIV
VPR
59.97
VIRpred_000528aatggagccagtagatcct
HIV
VPR
59.95
VIRpred_000529atggagccagtagatccta
HIV
VPR
59.48
VIRpred_000530agaattgggtgtcgacata
HIV
VPR
58.19
VIRpred_000531tgggtgtcgacatagcaga
HIV
VPR
57.67
VIRpred_000532aaatggagccagtagatcc
HIV
VPR
57.24
VIRpred_000533gcaagaaatggagccagta
HIV
VPR
57.11
VIRpred_000534gaatggacactagagcttt
HIV
VPR
57.01
VIRpred_000535attgggtgtcgacatagca
HIV
VPR
57
VIRpred_000536caggagtggaagccataat
HIV
VPR
56.18
VIRpred_000537atgaatggacactagagct
HIV
VPR
55.82
VIRpred_000538tacttgggcaggagtggaa
HIV
VPR
55.72
VIRpred_000539gtgtcgacatagcagaata
HIV
VPR
55.64
VIRpred_000540atacttgggcaggagtgga
HIV
VPR
55.56
VIRpred_000541aggagtggaagccataata
HIV
VPR
55.38
VIRpred_000542aagaaatggagccagtaga
HIV
VPR
55.22
VIRpred_000543tcagaattgggtgtcgaca
HIV
VPR
55.19
VIRpred_000544gaattgggtgtcgacatag
HIV
VPR
54.69
VIRpred_000545gaatgaagctgttagacat
HIV
VPR
54.19
VIRpred_000546cagaattgggtgtcgacat
HIV
VPR
54.06
VIRpred_000547ttgggtgtcgacatagcag
HIV
VPR
54
VIRpred_000548gaaatggagccagtagatc
HIV
VPR
53.98
VIRpred_000549catggcttagggcaacata
HIV
VPR
53.8
VIRpred_000550aattgggtgtcgacatagc
HIV
VPR
53.76
VIRpred_000551gaagacagtggcaatgaga
HIV
VPU
91.49
VIRpred_000552agtggcaatgagagtgaag
HIV
VPU
78.55
VIRpred_000553agttgtgtggtccatagta
HIV
VPU
77.51
VIRpred_000554tggcaatgagagtgaagga
HIV
VPU
77.29
VIRpred_000555gttgtgtggtccatagtaa
HIV
VPU
77.03
VIRpred_000556cagtggcaatgagagtgaa
HIV
VPU
75.44
VIRpred_000557gtggcaatgagagtgaagg
HIV
VPU
75.02
VIRpred_000558acagtggcaatgagagtga
HIV
VPU
74.58
VIRpred_000559agacagtggcaatgagagt
HIV
VPU
72.86
VIRpred_000560agagcagaagacagtggca
HIV
VPU
72.8
VIRpred_000561gcaatgagagtgaaggaga
HIV
VPU
71.03
VIRpred_000562gcaatagttgtgtggtcca
HIV
VPU
70.47
VIRpred_000563caatgagagtgaaggagaa
HIV
VPU
70.2
VIRpred_000564gtgtggtccatagtaatca
HIV
VPU
69.62
VIRpred_000565gcaacctataccaatagta
HIV
VPU
67.92
VIRpred_000566agaagacagtggcaatgag
HIV
VPU
65.67
VIRpred_000567gacagtggcaatgagagtg
HIV
VPU
65.61
VIRpred_000568ctccttgggatgttgatga
HIV
VPU
65.56
VIRpred_000569ggtccatagtaatcataga
HIV
VPU
65.28
VIRpred_000570gagcagaagacagtggcaa
HIV
VPU
64.93
VIRpred_000571gactaatagaaagagcaga
HIV
VPU
64.52
VIRpred_000572ggcaatgagagtgaaggag
HIV
VPU
64.49
VIRpred_000573cagaagacagtggcaatga
HIV
VPU
64.43
VIRpred_000574tagcaatagttgtgtggtc
HIV
VPU
63.95
VIRpred_000575aacctataccaatagtagc
HIV
VPU
63.89
VIRpred_000576gcauuggcuaccaaccuua
SARS
S-E2
93.87
VIRpred_000577guccuugcuuggaauacua
SARS
S-E2
91.21
VIRpred_000578gugcuaauuugcuucucca
SARS
S-E2
91.1
VIRpred_000579ugaccuucaagaauuggga
SARS
S-E2
90.32
VIRpred_000580cagcaauucaugcagauca
SARS
S-E2
87.04
VIRpred_000581ccaccugcucuuaauuguu
SARS
S-E2
85.87
VIRpred_000582caggagauguugugagauu
SARS
S-E2
84.5
VIRpred_000583cucaggagauguugugaga
SARS
S-E2
84.29
VIRpred_000584accagaaugcucaagcauu
SARS
S-E2
83.75
VIRpred_000585aagccuucaaaccuaugua
SARS
S-E2
83.17
VIRpred_000586gaaugugcuaauuugcuuc
SARS
S-E2
82.71
VIRpred_000587ccagaaugcucaagcauua
SARS
S-E2
82.45
VIRpred_000588ugugcuaauuugcuucucc
SARS
S-E2
82.25
VIRpred_000589auucaugcagaucaacuca
SARS
S-E2
82.2
VIRpred_000590gggcuaccaccuuaugucc
SARS
S-E2
82.01
VIRpred_000591agccuucaaaccuauguaa
SARS
S-E2
81.78
VIRpred_000592gaccuuauuaagaaccagu
SARS
S-E2
81.28
VIRpred_000593ggcauuggcuaccaaccuu
SARS
S-E2
81.27
VIRpred_000594guauguuuggcucggcuuc
SARS
S-E2
80.68
VIRpred_000595cuacagcaauucaugcaga
SARS
S-E2
80.32
VIRpred_000596gagccauucuuacagccuu
SARS
S-E2
79.84
VIRpred_000597aaaccuauguaacacaaca
SARS
S-E2
79.73
VIRpred_000598gguucuaccaugaacaaca
SARS
S-E2
79.32
VIRpred_000599caggcugucuuauaggagc
SARS
S-E2
79.3
VIRpred_000600uuguagucaagggagauga
SARS
S-E2
78.98
VIRpred_000601gaaccagcuugagagcaaa
SARS
N
101.57
VIRpred_000602gagccuugaauacacccaa
SARS
N
89.72
VIRpred_000603agauugaaccagcuugaga
SARS
N
88.46
VIRpred_000604ggagccuugaauacaccca
SARS
N
84.17
VIRpred_000605cagcuugagagcaaaguuu
SARS
N
81.39
VIRpred_000606ugaaccagcuugagagcaa
SARS
N
80.82
VIRpred_000607agccuugaauacacccaaa
SARS
N
80.69
VIRpred_000608acagauugaaccagcuuga
SARS
N
79.09
VIRpred_000609ccaauagugguccagauga
SARS
N
77.99
VIRpred_000610gacccacagauucaacuga
SARS
N
77.86
VIRpred_000611acaacgucacucaagcauu
SARS
N
77.77
VIRpred_000612cuagacagauugaaccagc
SARS
N
77.74
VIRpred_000613agacagauugaaccagcuu
SARS
N
77.06
VIRpred_000614gacagauugaaccagcuug
SARS
N
76.96
VIRpred_000615ccagcuugagagcaaaguu
SARS
N
76.54
VIRpred_000616ccagaauggaggacgcaau
SARS
N
76.5
VIRpred_000617gguccagaugaccaaauug
SARS
N
76.46
VIRpred_000618gaacaagcacauugacgca
SARS
N
76.37
VIRpred_000619cauuggcauggaagucaca
SARS
N
76.08
VIRpred_000620aaccagcuugagagcaaag
SARS
N
76.04
VIRpred_000621ggaggaacuuagauucccu
SARS
N
75.9
VIRpred_000622gcauggaagucacaccuuc
SARS
N
75.57
VIRpred_000623aaacauucccaccaacaga
SARS
N
75.15
VIRpred_000624uagacagauugaaccagcu
SARS
N
74.79
VIRpred_000625gguccagaacaaacccaag
SARS
N
74.5
VIRpred_000626gcaggaguugaauuucuca
SARS
orf1ab
96.59
VIRpred_000627gcacuugucuaccuugaug
SARS
orf1ab
92.9
VIRpred_000628aaccagaaccuacaccuga
SARS
orf1ab
90.34
VIRpred_000629guacccucuugauugcauc
SARS
orf1ab
89.9
VIRpred_000630cgagcuuggugaugucaga
SARS
orf1ab
89.61
VIRpred_000631cagcccuauguguucauua
SARS
orf1ab
88.9
VIRpred_000632cagcaugcuaauuuggaau
SARS
orf1ab
88.89
VIRpred_000633cgaugcagagugugaggaa
SARS
orf1ab
87.85
VIRpred_000634cagccuauagaccuuguac
SARS
orf1ab
87.79
VIRpred_000635acagcaugcuaauuuggaa
SARS
orf1ab
87.5
VIRpred_000636guaccuaccuacuaaugcu
SARS
orf1ab
87.28
VIRpred_000637gcacuuguggucuaguaga
SARS
orf1ab
87.25
VIRpred_000638gagcuucacuaccuacaac
SARS
orf1ab
87.05
VIRpred_000639agauugagccagaaccaga
SARS
orf1ab
87
VIRpred_000640augcagagugugaggaaga
SARS
orf1ab
86.78
VIRpred_000641gaacagcccuauguguuca
SARS
orf1ab
86.24
VIRpred_000642gagucgaagagaggugucu
SARS
orf1ab
85.9
VIRpred_000643gugcaggaguugaauuucu
SARS
orf1ab
85.57
VIRpred_000644aggacgaugcagaguguga
SARS
orf1ab
85.18
VIRpred_000645gcagcugcaacuacucaug
SARS
orf1ab
84.83
VIRpred_000646ggaugcaccuuacauggua
SARS
orf1ab
84.77
VIRpred_000647gaggcacgugaacaccuca
SARS
orf1ab
84.64
VIRpred_000648agaaccagaaccuacaccu
SARS
orf1ab
84.58
VIRpred_000649gaaguuguaggcaauguca
SARS
orf1ab
84.4
VIRpred_000650gcagccuauagaccuugua
SARS
orf1ab
84.39
VIRpred_000651gugguauucuugcuaguca
SARS
E
70.33
VIRpred_000652gugugcguacugcugcaau
SARS
E
64.28
VIRpred_000653gucacacuagccauccuua
SARS
E
61.94
VIRpred_000654cuuacugcgcuucgauugu
SARS
E
61.84
VIRpred_000655ggaguuccugaucuucugg
SARS
E
61.84
VIRpred_000656agucacacuagccauccuu
SARS
E
61.6
VIRpred_000657ugcuagucacacuagccau
SARS
E
61.52
VIRpred_000658cuugcuagucacacuagcc
SARS
E
61.14
VIRpred_000659uacugcgcuucgauugugu
SARS
E
60.83
VIRpred_000660ugugcguacugcugcaaua
SARS
E
60.72
VIRpred_000661uagccauccuuacugcgcu
SARS
E
59.89
VIRpred_000662uugcuagucacacuagcca
SARS
E
58.87
VIRpred_000663gcuucgauugugugcguac
SARS
E
58.03
VIRpred_000664agccauccuuacugcgcuu
SARS
E
56.96
VIRpred_000665auccuuacugcgcuucgau
SARS
E
56.81
VIRpred_000666guuccugaucuucuggucu
SARS
E
56.68
VIRpred_000667cguacugcugcaauauugu
SARS
E
56.52
VIRpred_000668uagucacacuagccauccu
SARS
E
56.45
VIRpred_000669acacuagccauccuuacug
SARS
E
56.18
VIRpred_000670gugcguacugcugcaauau
SARS
E
56.06
VIRpred_000671ucuugcuagucacacuagc
SARS
E
55.9
VIRpred_000672cauccuuacugcgcuucga
SARS
E
55.52
VIRpred_000673gaguuccugaucuucuggu
SARS
E
55.51
VIRpred_000674cacacuagccauccuuacu
SARS
E
55.13
VIRpred_000675guacugcugcaauauuguu
SARS
E
54.99
VIRpred_000676gauguggcuuagcuacuuc
SARS
M
89.22
VIRpred_000677gugcuugcugcugucuaca
SARS
M
86.9
VIRpred_000678guugcuuccuucaggcugu
SARS
M
85.23
VIRpred_000679guaggcuugauguggcuua
SARS
M
80.01
VIRpred_000680gcuugcugcugucuacaga
SARS
M
79.97
VIRpred_000681gcugcugucuacagaauua
SARS
M
78.76
VIRpred_000682guggcuuagcuacuucguu
SARS
M
77.97
VIRpred_000683cuugauguggcuuagcuac
SARS
M
77.06
VIRpred_000684gcuugauguggcuuagcua
SARS
M
76.61
VIRpred_000685ugugcuugcugcugucuac
SARS
M
76.48
VIRpred_000686ggaacaauggaaccuagua
SARS
M
76.23
VIRpred_000687uugcuuccuucaggcuguu
SARS
M
76.06
VIRpred_000688gaucacuguggcuacauca
SARS
M
75.94
VIRpred_000689caacccagaaacaaacauu
SARS
M
75.2
VIRpred_000690ugcuugcugcugucuacag
SARS
M
74.99
VIRpred_000691uuagcuacuucguugcuuc
SARS
M
74.99
VIRpred_000692cuucaggcuguuugcucgu
SARS
M
74.89
VIRpred_000693cuugcugcugucuacagaa
SARS
M
74.71
VIRpred_000694guacccgcucaaugugguc
SARS
M
74.69
VIRpred_000695gcuacuucguugcuuccuu
SARS
M
73.91
VIRpred_000696cauucaacccagaaacaaa
SARS
M
73.81
VIRpred_000697uuguaggcuugauguggcu
SARS
M
73.55
VIRpred_000698gcucuuguggccaguaaca
SARS
M
72.57
VIRpred_000699uugugcuugcugcugucua
SARS
M
71.58
VIRpred_000700cagcguguaggcacugauu
SARS
M
71.17
VIRpred_000701gcaucaacgcauguagaau
SARS
orf3a
95.05
VIRpred_000702augcaucaacgcauguaga
SARS
orf3a
91.66
VIRpred_000703ugcaucaacgcauguagaa
SARS
orf3a
89.9
VIRpred_000704cuaccagcuugagucuaca
SARS
orf3a
89.72
VIRpred_000705caucaacgcauguagaauu
SARS
orf3a
87.3
VIRpred_000706cagcuugagucuacacaaa
SARS
orf3a
85.12
VIRpred_000707gcaaguacuguucaugcua
SARS
orf3a
83.58
VIRpred_000708caaugcaucaacgcaugua
SARS
orf3a
83.48
VIRpred_000709gauguuggcuuuguuggaa
SARS
orf3a
82.66
VIRpred_000710agacccaccgaaugugcaa
SARS
orf3a
81.29
VIRpred_000711aaugcaucaacgcauguag
SARS
orf3a
81.06
VIRpred_000712ccagcuugagucuacacaa
SARS
orf3a
80.29
VIRpred_000713guacuguucaugcuacagc
SARS
orf3a
79.66
VIRpred_000714caacgcauguagaauuauu
SARS
orf3a
79.58
VIRpred_000715guaccucuaugccuugaua
SARS
orf3a
76.61
VIRpred_000716ggcuuccaguucauuugca
SARS
orf3a
76.45
VIRpred_000717gaaguuuacuaccagcuug
SARS
orf3a
76.4
VIRpred_000718agauguuggcuuuguugga
SARS
orf3a
75.75
VIRpred_000719gggcuuccaguucauuugc
SARS
orf3a
74.83
VIRpred_000720acuaccagcuugagucuac
SARS
orf3a
74.42
VIRpred_000721cuacuagcgugccuuugua
SARS
orf3a
74.42
VIRpred_000722gcuuccaguucauuugcaa
SARS
orf3a
74.17
VIRpred_000723ggcuuuguuggaagugcaa
SARS
orf3a
74.13
VIRpred_000724ccagcaauggauccaauuu
SARS
orf3a
74.04
VIRpred_000725ggcucuucaggaguugcua
SARS
orf3a
74.01
VIRpred_000726cuaccagcuugagucuaca
SARS
sars3b
89.72
VIRpred_000727cagcuugagucuacacaaa
SARS
sars3b
85.12
VIRpred_000728agacccaccgaaugugcaa
SARS
sars3b
81.29
VIRpred_000729ccagcuugagucuacacaa
SARS
sars3b
80.29
VIRpred_000730gaaguuuacuaccagcuug
SARS
sars3b
76.4
VIRpred_000731acuaccagcuugagucuac
SARS
sars3b
74.42
VIRpred_000732cuacuagcgugccuuugua
SARS
sars3b
74.42
VIRpred_000733ccagcaauggauccaauuu
SARS
sars3b
74.04
VIRpred_000734ggcucuucaggaguugcua
SARS
sars3b
74.01
VIRpred_000735gacccaccgaaugugcaaa
SARS
sars3b
73.37
VIRpred_000736gugacggcauuucaacacc
SARS
sars3b
72.53
VIRpred_000737guuuacuaccagcuugagu
SARS
sars3b
72.43
VIRpred_000738aagacccaccgaaugugca
SARS
sars3b
71.91
VIRpred_000739gacggcauuucaacaccaa
SARS
sars3b
71.57
VIRpred_000740caagcuuguuaaagaccca
SARS
sars3b
70.98
VIRpred_000741acggcauuucaacaccaaa
SARS
sars3b
70.13
VIRpred_000742gcucuucaggaguugcuaa
SARS
sars3b
69.73
VIRpred_000743guacgaacuuauguacuca
SARS
sars3b
67.95
VIRpred_000744cagcaauggauccaauuua
SARS
sars3b
67.87
VIRpred_000745augucguuguacauggcua
SARS
sars3b
67.34
VIRpred_000746uuacuaccagcuugagucu
SARS
sars3b
67.14
VIRpred_000747ugacggcauuucaacacca
SARS
sars3b
67.13
VIRpred_000748gcgugccuuuguaagcaca
SARS
sars3b
67.13
VIRpred_000749gaaggugacggcauuucaa
SARS
sars3b
67.12
VIRpred_000750accagcuugagucuacaca
SARS
sars3b
67.04