Research Papers of Dr. Manoj Kumar's Group

2016

2015

2014

2013

2012

2011

Before 2011

 
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Papers of Year-2016

  1. Showkat Ahmad Dar, Anamika Thakur, Abid Qureshi, Manoj Kumar (2016) siRNAmod: A database of experimentally validated chemically modified siRNAs, Scientific reports, 6, 20031; doi: 10.1038/srep20031

Papers of Year-2015

  1. Mohd Shoaib Khan, Amit Kumar Gupta, Manoj Kumar (2015) ViralEpi v1. 0: a high-throughput spectrum of viral epigenomic methylation profiles from diverse diseases, Epigenomics, 8(1), pp. 67-75
  2. Qureshi, Abid and Tandon, Himani and Kumar, Manoj (2015) AVP-IC50 Pred: Multiple machine learning techniques-based prediction of peptide antiviral activity in terms of half maximal inhibitory concentration (IC50 ). Biopolymers, 104 (6). pp. 753-63. ISSN 1097-0282
  3. Kaur, Karambir and Tandon, Himani and Gupta, Amit Kumar and Kumar, Manoj (2015) CrisprGE: a central hub of CRISPR/Cas-based genome editing. Database : the journal of biological databases and curation, 2015. ISSN 1758-0463
  4. Gupta, Amit Kumar and Kumar, Manoj (2015) HPVbase--a knowledgebase of viral integrations, methylation patterns and microRNAs aberrant expression: As potential biomarkers for Human papillomaviruses mediated carcinomas. Scientific reports, 5. p. 12522. ISSN 2045-2322
  5. Rajput, Akanksha and Gupta, Amit Kumar and Kumar, Manoj (2015) Prediction and analysis of quorum sensing peptides based on sequence features. PloS one, 10 (3). e0120066. ISSN 1932-6203
  6. Rajput, Akanksha and Kaur, Karambir and Kumar, Manoj (2015) SigMol: repertoire of quorum sensing signaling molecules in prokaryotes, Nucleic Acids Research, 44/D1/D634

Papers of Year-2014

  1. Qureshi, Abid and Thakur, Nishant and Tandon, Himani and Kumar, Manoj (2014) AVPdb: a database of experimentally validated antiviral peptides targeting medically important viruses. Nucleic acids research, 42 (Databa). D1147-53. ISSN 1362-4962
  2. Qureshi, Abid and Thakur, Nishant and Monga, Isha and Thakur, Anamika and Kumar, Manoj (2014) VIRmiRNA: a comprehensive resource for experimentally validated viral miRNAs and their targets. Database : the journal of biological databases and curation, 2014. ISSN 1758-0463

Papers of Year-2013

  1. Qureshi, Abid and Thakur, Nishant and Kumar, Manoj (2013) HIPdb: A Database of Experimentally Validated HIV Inhibiting Peptides. PloS one, 8 (1). e54908. ISSN 1932-6203
  2. Qureshi, Abid and Thakur, Nishant and and Kumar, Manoj (2013) VIRsiRNApred: a web server for predicting inhibition efficacy of siRNAs targeting human viruses, Journal of translational medicine, 11(1), pp. 305

Papers of Year-2012

  1. Thakur, Nishant and Qureshi, Abid and Kumar, Manoj (2012) AVPpred: collection and prediction of highly effective antiviral peptides. Nucleic acids research, 40 (Web Se). W199-204. ISSN 1362-4962
  2. Thakur, Nishant and Qureshi, Abid and Kumar, Manoj (2012) VIRsiRNAdb: a curated database of experimentally validated viral siRNA/shRNA. Nucleic acids research, 40. D230-6. ISSN 1362-4962

Papers of Year-2011

  1. Tyagi, Atul and Ahmed, Firoz and Thakur, Nishant and Sharma, Arun and Raghava, G.P.S. and Kumar, Manoj (2011) HIVsirDB: A Database of HIV Inhibiting siRNAs. PloS one, 6 (10). e25917. ISSN 1932-6203
  2. Thakur, Nishant and Qureshi, Abid and Kumar, Manoj (2011) VIRsiRNAdb: a curated database of experimentally validated viral siRNA/shRNA, Nucleic Acids Research, 40 (D1): D230-D236

Papers of Year-2010 & Before

  1. Himani Kukreti, Veena Mittal, Artee Chaudhary, Rajendra Singh Rautela, Manoj Kumar, Sheetal Chauhan, Sunil Bhat, Mala Chhabra, Dipesh Bhattacharya, Syed Tazeen Pasha, Devinder Kumar, Sunil Gomber, Shiv Lal, Arvind Rai (2010) Continued persistence of a single genotype of dengue virus type-3 (DENV-3) in Delhi, India since its re-emergence over the last decade, Journal of Microbiology, Immunology and Infection, 43(1), pp. 53-61
  2. Kalia, S.B. and Kaushal, G. and Kumar, Manoj and Cameotra, Swaranjit Singh and Sharma, A. and Verma , M.L. and Kanwar, S.S. (2009) Antimicrobial and toxicological studies of some metal complexes of 4- methylpiperazine-1-carbodithioate and phenanthroline mixed ligands. Brazilian Journal of Microbiology, 40. pp. 916-922. ISSN 1517-8382
  3. Kumar, Manoj and Jain, Swatantra Kumar and Pasha, S.T and Chattopadhaya, Debasish and Lal, Shiv and Rai, Arvind (2006) Genomic diversity in the regulatory nef gene sequences in Indian isolates of HIV type 1: emergence of a distinct subclade and predicted implications. AIDS research and human retroviruses, 22 (12). pp. 1206-19. ISSN 0889-2229
  4. Dash, Paban Kumar and Parida, Man Mohan and Saxena, Parag and Kumar, Manoj and Rai, Arvind and Pasha, S.T and Jana, Asha Mukul (2004) Emergence and continued circulation of dengue-2 (genotype IV) virus strains in northern India. Journal of medical virology, 74 (2). pp. 314-22. ISSN 0146-6615
  5. Kumar, Manoj and Pasha, S.T and Mittal, V. and Arya, S.C. and Agrawal, N. and Bhattacharya, D. and Shiv, Lal and Rai, Arvind (2004) Unusual emergence of guate98-like molecular subtype of DEN-3 during 2003 dengue outbreak in Delhi. Dengue Bulletin, 28. pp. 457-461.
  6. R Anand, D Ghosh, AV Bhupatiraju, S Broor, ST Pasha, S Khare, M Kumar, KK Dutta, A Rai (2002) Partial VP1/2A gene sequence based molecular epidemiology of wild type 1 poliovirus isolates from some parts of India, Epidemiology and infection, 129(01), pp. 107-112
 

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