Informatics related Resources Developed & Maintained by CSIR
Name | Description | Institute |
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ADPint | Adenosine diphosphate (ADP), is a small nucleotide. It is an ester of pyrophosphoric acid with the nucleoside adenosine. ADP interacts with a proteins/purinergic receptors found on platelets leading to platelet activation. | CSIR-IMTECH |
ATPint | ATP-binding proteins are members of a protein that is one of the largest, and most ancient proteins present in all extant phyla from prokaryotes to humans. | CSIR-IMTECH |
DOMprint | Domprint is a domain-domain interaction (DDI) prediction server. It runs on a support vector machine (SVM) model which has been trained on known domain-domain interaction data (positive dataset) from 3did database. | CSIR-IMTECH |
IPW | Community editable database of protein-protein functional interactions and reactome of Mycobacterium tuberculosis (Mtb). The database holds the largest number of manually curated interactions and metabolic reactions in Mtb [PMID: 22808064] | CSIR-IMTECH |
GlycoPP | GlycoPP is a webserver for predicting potential N-and O-glycosites in prokaryotic protein sequence(s), where N-glycosite is an Asn residue and O-glycosite could be a serine or threonine residue having a glycan attached covalently and enzymatically at amide or hydroxyl group respectively. | CSIR-IMTECH |
GTPbinder | GTPBinder: is a web based tool for prediction of GTP binding residue in protein sequence.It takes amino acid sequence in FASTA format as input and predict the GTP-interacting residues with Support Vector Machine (SVM). | CSIR-IMTECH |
MYCOprint | MycoPrint is a web interface for exploration of the interactome of Mycobacterium tuberculosis H37Rv (Mtb) predicted by "Domain Interaction Mapping" (DIM) method. | CSIR-IMTECH |
NADbinder | This server predicts NAD binding proteins and their interacting residues, in the absence of any prior structural information | CSIR-IMTECH |
Pprint | Pprint (Prediction of Protein RNA- Interaction) is a web-server for predicting RNA-binding residues of a protein. The prediction is done by SVM model trained on PSSM profile generated by PSI-BLAST search of 'nr' protein database. | CSIR-IMTECH |
PreMieR | PreMieR is a web-server specially trained for the identification of mannose interacting residues (MIRs).These MIRs helps in recognition of pathogens from their surface sugar like mannose. | CSIR-IMTECH |
PROprint | Proprint web-server predicts physical or functional interactions between protein molecules. | CSIR-IMTECH |
RNApin | RNApin is a Support Vector Machines (SVMs) based web-server for the prediction of Protein Interacting Nucleotides (PINs) in RNA sequences. RNApin is freely available for the acadamic use of global scientific community. | CSIR-IMTECH |
tRNAmod | The tRNAmod is a web-server for the prediction of transfer RNA (tRNA) modifications. Post-transcriptional modifications of tRNA plays a major role in their functionality. It provides both flexibility as well as rigidity and fine tune tRNA structure for the maximum performance. | CSIR-IMTECH |
VitaPred | VitaPred is a SVM (Support Vector Machines) based prediction method for the vitamin-interacting residues in protein sequences. Vitamins play vital role in the cell and involves in the various enzymatic reaction and functions as a cofactor. | CSIR-IMTECH |