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Next   PreviousPage - 1 of 7 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) GC Content (%) Cell line PubMed 1453 HIV-1 (NL4-3) AF324493 Pol 921 AUGGAAAGGAUCACCAGCAA 81.00 36 HEK 293a 19497094 1648 HIV-1 (NL4-3) AF324493 Gag/pol 3410 ACUUUCUAUGUAGAUGGGGC 89.00 36 293 FT cells 20949027 1646 HIV-1 (NL4-3) AF324493 Gag/pol 3322 GAGUGGGAGUUUGUCAAUAC 82.00 36 293 FT cells 20949027 1644 HIV-1 (NL4-3) AF324493 Gag/pol 3302 ACAGAGUAUUGGCAAGCAAC 90.00 36 293 FT cells 20949027 1642 HIV-1 (NL4-3) AF324493 Gag/pol 2893 GGCAAGUCAGAUUUAUGCAG 87.00 36 293 FT cells 20949027 1638 HIV-1 (NL4-3) AF324493 Gag/pol 1873 UACAGGAGCAGAUGAUACAG 81.00 36 293 FT cells 20949027 1440 HIV-1 (NL4-3) AF324493 Gag 698 GAAGUGACAUAGCAGGAACU 87.90 36 HEK 293a 19497094 1518 HIV-1 (NL4-3) AF324493 Nef 351 ACAAGGCUACUUCCCUGAUU 52.20 36 HEK 293a 19497094 1497 HIV-1 (NL4-3) AF324493 Vpu 149 AAGACAGUGGCAAUGAGAGU 89.70 36 HEK 293a 19497094 1476 HIV-1 (NL4-3) AF324493 Vif 12 AUGGCAGGUGAUGAUUGUGU 69.20 36 HEK 293a 19497094 1438 HIV-1 (NL4-3) AF324493 Gag 535 GCCACCCCACAAGAUUUAAA 48.60 36 HEK 293a 19497094 1429 HIV-1 (NL4-3) AF324493 LTR 522 GCCUCAAUAAAGCUUGCCUU 52.60 36 HEK 293a 19497094 1467 HIV-1 (NL4-3) AF324493 pol 2879 GUGAAGGGGCAGUAGUAAUA 98.80 36 HEK 293a 19497094 1469 HIV-1 (NL4-3) AF324493 pol 2880 UGAAGGGGCAGUAGUAAUAC 84.00 36 HEK 293a 19497094 1585 HIV-1 (IIIB) EU541617 Gag K*2062 GAUUGUACUGAGAGACAGG 88.00 38 Hela 15831707 1094 HIV-1 (R3b) K02013 vif N/A GGAAAGCUAAGGACUGGUU 87.00 38 CEMx174 15851006 1582 UG29 K02013 vif K*5195 GUUCAGAAGUACACAUCCC 95.00 38 Hela 15831707 1581 HIV-1(P89) K02013 vif K*5195 GUUCAGAAGUACACAUCCC 82.00 38 Hela 15831707 1580 HIV-1(P89) K02013 Gag K*2062 GAUUGUACUGAGAGACAGG 90.00 38 Hela 15831707 1578 HIV-1(BAL) K02013 vif K*5195 GUUCAGAAGUACACAUCCC 80.00 38 Hela 15831707 1436 HIV-1 (NL4-3) AF324493 Gag 534 AGCCACCCCACAAGAUUUA 85.30 38 HEK 293a 19497094 1162 HIV-1 (LAI) K02013 Pol 4392 ACAGUGCAGGGGAAAGAAU 23.00 38 293 T 16959541 1577 HIV-1(BAL) K02013 Gag K*2062 GAUUGUACUGAGAGACAGG 88.00 38 Hela 15831707 1575 HIV-1 (IIIB) EU541617 vif K*5195 GUUCAGAAGUACACAUCCC 80.00 38 Hela 15831707 1574 HIV-1 (IIIB) EU541617 Gag K*2062 GAUUGUACUGAGAGACAGG 91.00 38 Hela 15831707

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