VIRmiRNA -A database of viral miRNA
VMR_0118 details

miRNA Id:VMR_0118
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart20-5p
miRNA Sequence: uagcaggcaugucuucauucc
Length: 21
Predicted secondary structure (UNAfold):
GC Content (%):47.62
pre-miRNA:ebv-mir-bart20
pre-miRNA Sequence:uacaggcguagggccuauuguagcaggcaugucuucauuccugcguaccgaauggcaugaaggcacagccuguuaccauuggcaccuuuuuuccaugua
Arm: 5p
Cell line: Jijoye cells
Method:Northern blot analysis, Cloned
Reference: 16540699, 17604727
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed