VIRmiRNA -A database of viral miRNA
VMR_0163 details

miRNA Id:VMR_0163
Virus:Herpes B virus (HBV)
Taxonomy:View
Nomenclature:hbv-miR-b20-3p
miRNA Sequence: ugcugguugcccgcgcucucgg
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):72.73
pre-miRNA:hbv-mir-b20
pre-miRNA Sequence:cgccggcggcggccgagagugaggguggcgagcgcguggacgcaccucccgacgugcugguugcccgcgcucucgggcgcggccggacg
Arm: 3p
Cell line: Vero cells, HeLa cells
Method:Deep sequencing
Reference: 21543500
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed