VIRsiRNAdb

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Total number of Results for 17112601 are 2
Results from 0 - 25

siRNA sequence "ggaccaaaagaaacaccaucc" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "ggaccaaaagaaacaccaucc" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2216 " record
Length: 21
GC Content:48 %
Strain of Virus: 3a
GenBank Acc: EU266536.
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggaccaaaagaaacaccaucc" siRNA in Human Genome sequences
See EU266536. at Genbank
Pubmed:17112601
Article:Inhibition of SARS-CoV replication cycle by small interference RNAs silencing specific SARS proteins, 7a/7b, 3a/3b and S.
Authors:Akerström S, Mirazimi A, Tan YJ.
Journal:Antiviral Res. 2007 Mar;73(3):219-27. Epub 2006 Nov 7.
Entrez:17112601

siRNA sequence "gguuuggguaaagucaucgau" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "gguuuggguaaagucaucgau" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2217 " record
Length: 21
GC Content:43 %
Strain of Virus: 3a
GenBank Acc: EU266536
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gguuuggguaaagucaucgau" siRNA in Human Genome sequences
See EU266536 at Genbank
Pubmed:17112601
Article:Inhibition of SARS-CoV replication cycle by small interference RNAs silencing specific SARS proteins, 7a/7b, 3a/3b and S.
Authors:Akerström S, Mirazimi A, Tan YJ.
Journal:Antiviral Res. 2007 Mar;73(3):219-27. Epub 2006 Nov 7.
Entrez:17112601


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2216	ggaccaaaagaaacaccaucc	Hepatitis C Virus [HCV]	C	Huh-7	Protein	90	17112601	Blast SL	refseqs
virsi2217	gguuuggguaaagucaucgau	Hepatitis C Virus [HCV]	C	Huh-7	Protein	76	17112601	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm