VIRsiRNAdb

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Total number of Results for 20105445 are 5
Results from 0 - 25

siRNA sequence "cucgggaguuauaguuuau" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "cucgggaguuauaguuuau" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2195 " record
Length: 19
GC Content:37 %
GenBank Acc: AF076239
Transfection Reagent: Lipofectamine 2000 / FuGENE 6
Incubation Time (Hours):72

Offtargets for "cucgggaguuauaguuuau" siRNA in Human Genome sequences
See AF076239 at Genbank
Pubmed:20105445
Article:Inhibition of Hepatitis E virus replication using short hairpin RNA (shRNA).
Authors:Kumar A, Panda SK, Durgapal H, Acharya SK, Rehman S, Kar UK.
Journal:Antiviral Res. 2010 Mar;85(3):541-50. Epub 2010 Jan 25.
Entrez:20105445

siRNA sequence "ccugauuggcaugcuacag" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "ccugauuggcaugcuacag" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2194 " record
Length: 19
GC Content:53 %
GenBank Acc: AF076239
Transfection Reagent: Lipofectamine 2000 / FuGENE 6
Incubation Time (Hours):72

Offtargets for "ccugauuggcaugcuacag" siRNA in Human Genome sequences
See AF076239 at Genbank
Pubmed:20105445
Article:Inhibition of Hepatitis E virus replication using short hairpin RNA (shRNA).
Authors:Kumar A, Panda SK, Durgapal H, Acharya SK, Rehman S, Kar UK.
Journal:Antiviral Res. 2010 Mar;85(3):541-50. Epub 2010 Jan 25.
Entrez:20105445

siRNA sequence "gugggucaucauugacgca" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "gugggucaucauugacgca" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2192 " record
Length: 19
GC Content:53 %
GenBank Acc: AF076239
Transfection Reagent: Lipofectamine 2000 / FuGENE 6
Incubation Time (Hours):72

Offtargets for "gugggucaucauugacgca" siRNA in Human Genome sequences
See AF076239 at Genbank
Pubmed:20105445
Article:Inhibition of Hepatitis E virus replication using short hairpin RNA (shRNA).
Authors:Kumar A, Panda SK, Durgapal H, Acharya SK, Rehman S, Kar UK.
Journal:Antiviral Res. 2010 Mar;85(3):541-50. Epub 2010 Jan 25.
Entrez:20105445

siRNA sequence "caaguucaccacaggugag" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "caaguucaccacaggugag" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2193 " record
Length: 19
GC Content:53 %
GenBank Acc: AF076239
Transfection Reagent: Lipofectamine 2000 / FuGENE 6
Incubation Time (Hours):72

Offtargets for "caaguucaccacaggugag" siRNA in Human Genome sequences
See AF076239 at Genbank
Pubmed:20105445
Article:Inhibition of Hepatitis E virus replication using short hairpin RNA (shRNA).
Authors:Kumar A, Panda SK, Durgapal H, Acharya SK, Rehman S, Kar UK.
Journal:Antiviral Res. 2010 Mar;85(3):541-50. Epub 2010 Jan 25.
Entrez:20105445

siRNA sequence "acuaguguucacccaggcg" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "acuaguguucacccaggcg" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2191 " record
Length: 19
GC Content:58 %
GenBank Acc: AF076239
Transfection Reagent: Lipofectamine 2000 / FuGENE 6
Incubation Time (Hours):72

Offtargets for "acuaguguucacccaggcg" siRNA in Human Genome sequences
See AF076239 at Genbank
Pubmed:20105445
Article:Inhibition of Hepatitis E virus replication using short hairpin RNA (shRNA).
Authors:Kumar A, Panda SK, Durgapal H, Acharya SK, Rehman S, Kar UK.
Journal:Antiviral Res. 2010 Mar;85(3):541-50. Epub 2010 Jan 25.
Entrez:20105445


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2195	cucgggaguuauaguuuau	Hepatitis E Virus [HEV]	3CAE	HepG2	Protein	82	20105445	Blast SL	refseqs
virsi2194	ccugauuggcaugcuacag	Hepatitis E Virus [HEV]	Replicase	HepG2	Protein	75	20105445	Blast SL	refseqs
virsi2192	gugggucaucauugacgca	Hepatitis E Virus [HEV]	Helicase	HepG2	Protein	70	20105445	Blast SL	refseqs
virsi2193	caaguucaccacaggugag	Hepatitis E Virus [HEV]	Replicase	HepG2	Protein	58	20105445	Blast SL	refseqs
virsi2191	acuaguguucacccaggcg	Hepatitis E Virus [HEV]	Helicase	HepG2	Protein	35	20105445	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm