Items where Year is 2013

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Number of items: 117.

A

Agarwal, Shruti and Rastogi, Ruchir and Gupta, Deepika and Patel, Nitin and Raje, Manoj and Mukhopadhyay, Amitabha (2013) Clathrin-mediated hemoglobin endocytosis is essential for survival of Leishmania. Biochimica et biophysica acta, 1833 (5). pp. 1065-77. ISSN 0006-3002

Ahmed, Firoz and Kaundal, Rakesh and Raghava, g (2013) PHDcleav: a SVM based method for predicting human Dicer cleavage sites using sequence and secondary structure of miRNA precursors. BMC bioinformatics, 14 Sup. S9. ISSN 1471-2105

Aneja, Rachna and Datt, Manish and Yadav, Suman and Sahni, Girish (2013) Multiple exosites distributed across the three domains of streptokinase co-operate to generate high catalytic rates in the streptokinase-plasmin activator complex. Biochemistry, 52 (49). pp. 8957-68. ISSN 1520-4995

Ansari, Hifzur Rahman and Raghava, G.P.S. (2013) In silico models for B-cell epitope recognition and signaling. Methods in molecular biology (Clifton, N.J.), 993. pp. 129-38. ISSN 1940-6029

Ansari, Mohammad Azam and Khan, Haris Manzoor and Khan, Aijaz Ahmed and Ahmad, Mohammad Kaleem and Mahdi, Abbas Ali and Pal, Ruchita and Cameotra, Swaranjit Singh (2013) Interaction of silver nanoparticles withEscherichia coliand their cell envelope biomolecules. Journal of Basic Microbiology. ISSN 0233111X

Arif, Ehtesham and Mallik, Leena and Rathore, Yogendra S and Kumari, Babita and Ostap, Michael and Ashish, . and Holzman, Lawrence B and Nihalani, Deepak (2013) Myo1c, an unconventional motor that maintains glomerular filtration function. FASEB Journal, 27.

Arrieta-Ortiz, Mario L and Rodríguez-R, Luis M and Pérez-Quintero, Álvaro L and Poulin, Lucie and Díaz, Ana C and Arias Rojas, Nathalia and Trujillo, Cesar and Restrepo Benavides, Mariana and Bart, Rebecca and Boch, Jens and Boureau, Tristan and Darrasse, Armelle and David, Perrine and Dugé de Bernonville, Thomas and Fontanilla, Paula and Gagnevin, Lionel and Guérin, Fabien and Jacques, Marie-Agnès and Lauber, Emmanuelle and Lefeuvre, Pierre and Medina, Cesar and Medina, Edgar and Montenegro, Nathaly and Muñoz Bodnar, Alejandra and Noël, Laurent D and Ortiz Quiñones, Juan F and Osorio, Daniela and Pardo, Carolina and Patil, Prabhu B and Poussier, Stéphane and Pruvost, Olivier and Robène-Soustrade, Isabelle and Ryan, Robert P and Tabima, Javier and Urrego Morales, Oscar G and Vernière, Christian and Carrere, Sébastien and Verdier, Valérie and Szurek, Boris and Restrepo, Silvia and López, Camilo and Koebnik, Ralf and Bernal, Adriana (2013) Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. Manihotis strain CIO151. PloS one, 8 (11). e79704. ISSN 1932-6203

Arya, Swati and Sethi, Deepti and Singh, Sandeep and Hade, Mangesh Dattu and Singh, Vijender and Raju, Preeti and Chodisetti, Sathi Babu and Verma, Deepshikha and Varshney, Grish C and Agrewala, J N and Dikshit, Kanak L (2013) Truncated hemoglobin, HbN, is post-translationally modified in Mycobacterium tuberculosis and modulates host-pathogen interactions during intracellular infection. The Journal of biological chemistry, 288 (41). pp. 29987-99. ISSN 1083-351X

B

Baindara, Piyush and Mandal, Santi M and Chawla, Niharika and Singh, Pradip Kumar and Pinnaka, Anil Kumar and Korpole, Suresh (2013) Characterization of two antimicrobial peptides produced by a halotolerant Bacillus subtilis strain SK.DU.4 isolated from a rhizosphere soil sample. AMB Express, 3 (1). p. 2. ISSN 2191-0855

Bala, Monu and Kumar, Shailesh and Raghava, G.P.S. and Mayilraj, Shanmugam (2013) Draft Genome Sequence of Rhodococcus ruber Strain BKS 20-38. Genome announcements, 1 (2). e0013913. ISSN 2169-8287

Bhartiya, Deeksha and Pal, Koustav and Ghosh, Sourav and Kapoor, Shruti and Jalali, Saakshi and Panwar, Bharat and Jain, Sakshi and Sati, Satish and Sengupta, Shantanu and Sachidanandan, Chetana and Raghava, G.P.S. and Sivasubbu, Sridhar and Scaria, Vinod (2013) lncRNome: a comprehensive knowledgebase of human long noncoding RNAs. Database : the journal of biological databases and curation, 2013. ISSN 1758-0463

Bhumika, V and Srinivas, T N R and Kumar, P Anil (2013) Flavobacterium nitratireducens sp. nov., an amylolytic bacterium of the family Flavobacteriaceae isolated from coastal surface seawater. International journal of systematic and evolutionary microbiology, 63 (Pt 7). pp. 2490-6. ISSN 1466-5034

Bhumika, V and Srinivas, T N R and Ravinder, K and Kumar, P Anil (2013) Mariniradius saccharolyticus gen. nov., sp. nov., a member of the family Cyclobacteriaceae isolated from marine aquaculture pond water, and emended descriptions of the genus Aquiflexum and Aquiflexum balticum. International journal of systematic and evolutionary microbiology, 63 (Pt 6). pp. 2088-94. ISSN 1466-5034

Budyak, Ivan L and Krishnan, Beena and Marcelino-Cruz, Anna M and Ferrolino, Mylene C and Zhuravleva, Anastasia and Gierasch, Lila M (2013) Early folding events protect aggregation-prone regions of a β-rich protein. Structure (London, England : 1993), 21 (3). pp. 476-85. ISSN 1878-4186

C

Chandra, Vemika and Mahajan, Sahil and Saini, Ankita and Dkhar, Hedwin K and Nanduri, Ravikanth and Raj, Ella B and Kumar, Ashwani and Gupta, Pawan (2013) Human IL10 gene repression by Rev-erbα ameliorates Mycobacterium tuberculosis clearance. The Journal of biological chemistry, 288 (15). pp. 10692-702. ISSN 1083-351X

Chauhan, Jagat S (2013) In-silico approches for designing inhibitor based on protein- small ligand interaction. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.

Chauhan, Jagat Singh and Rao, Alka and Raghava, G.P.S. (2013) In silico platform for prediction of N-, O- and C-glycosites in eukaryotic protein sequences. PloS one, 8 (6). e67008. ISSN 1932-6203

Chodisetti, Sathi Babu and Jain, Shweta and Agrewala, J N (2013) Cooperation of CD86 signaling with TLR-2 in the activation of resting B cells: a novel BCR independent pathway of stimulating B cells (P1126). Journal of Immunology, 190.

Chopra, Adity and Tuteja, Satish and Sachdeva, Naresh and Bhasin, K K and Bhalla, Vijayender and Suri, C Raman (2013) CdTe nanobioprobe based optoelectrochemical immunodetection of diabetic marker HbA1c. Biosensors & bioelectronics, 44. pp. 132-5. ISSN 1873-4235

Choudhury, Anirban Roy and Bhattacharjee, Paramita and Prasad, G S (2013) Development of suitable solvent system for downstream processing of biopolymer pullulan using response surface methodology. PloS one, 8 (10). e77071. ISSN 1932-6203

D

Das, Arijit Kumar and Kumar, Vijjamarri Anil and Sevalkar, Ritesh Rajesh and Bansal, Roohi and Sarkar, Dibyendu (2013) Unique N-terminal arm of Mycobacterium tuberculosis PhoP protein plays an unusual role in its regulatory function. The Journal of biological chemistry, 288 (40). pp. 29182-92. ISSN 1083-351X

Dave, Sandeep (2013) Regulation of Adipocyte Function by all-trans-Retinoic acid, Pyridoxal-5'-phosphate and Therapeutic Protease. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi .

Davidge, Kelly S and Dikshit, Kanak L (2013) Haemoglobins of Mycobacteria: structural features and biological functions. Advances in microbial physiology, 63. pp. 147-94. ISSN 0065-2911

Devi, Usha and Khatri, Indu and Kumar, Navinder and Sharma, Deepak and Subramanian, Srikrishna and Saini, Adesh K (2013) Draft Genome Sequence of Plant-Growth-Promoting Rhizobacterium Serratia fonticola Strain AU-AP2C, Isolated from the Pea Rhizosphere. Genome announcements, 1 (6). ISSN 2169-8287

Dhanda, Sandeep Kumar and Singla, Deepak and Mondal, Alok K and Raghava, G.P.S. (2013) DrugMint: a webserver for predicting and designing of drug-like molecules. Biology direct, 8. p. 28. ISSN 1745-6150

Dhanda, Sandeep Kumar and Vir, Pooja and Raghava, G.P.S. (2013) Designing of interferon-gamma inducing MHC class-II binders. Biology direct, 8. p. 30. ISSN 1745-6150

Dutta, Rajesh Kumar (2013) Interleukin-6 and Mycobacterial Infection. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

E

Ekka, Mary Krishna (2013) Understanding the Molecular Mechanism of Cysteine Synthase Assembly and its Regulatory Role in bacterial Cysteine Biosynthesis. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

Elias, Dwayne and Choudhury, Anirban Roy and Bhattacharjee, Paramita and Prasad, G S (2013) Development of Suitable Solvent System for Downstream Processing of Biopolymer Pullulan Using Response Surface Methodology. PLoS ONE, 8 (10). e77071. ISSN 1932-6203

F

Ferrolino, Mylene C and Zhuravleva, Anastasia and Budyak, Ivan L and Krishnan, Beena and Gierasch, Lila M (2013) Delicate balance between functionally required flexibility and aggregation risk in a β-rich protein. Biochemistry, 52 (49). pp. 8843-54. ISSN 1520-4995

G

Gautam, Ankur and Chaudhary, Kumardeep and Kumar, Rahul and Sharma, Arun and Kapoor, Pallavi and Tyagi, Atul and Raghava, G.P.S. (2013) In silico approaches for designing highly effective cell penetrating peptides. Journal of translational medicine, 11. p. 74. ISSN 1479-5876

Ghosh, Moumita and Solanki, Ashish K and Roy, Koushik and Dhoke, Reema R and Ashish, . and Roy, Syamal (2013) Carrier protein influences immunodominance of a known epitope: implication in peptide vaccine design. Vaccine, 31 (41). pp. 4682-8. ISSN 1873-2518

Gowthaman, Uthaman and Rai, Pradeep K and Zeng, Weiguang and Jackson, David C and Agrewala, J N (2013) Lipidated promiscuous peptide augments the expression of MHC-II molecules on dendritic cells and activates T cells. The Indian journal of medical research, 138 (5). pp. 744-8. ISSN 0971-5916

Goyal, Rajni (2013) Studies on regulatory role of virulence-associated response regulator PhoP in Mycobacterium tuberculosis. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Gupta, Sudheer and Ansari, Hifzur Rahman and Gautam, Ankur and Raghava, G.P.S. (2013) Identification of B-cell epitopes in an antigen for inducing specific class of antibodies. Biology direct, 8. p. 27. ISSN 1745-6150

Gupta, Sudheer and Kapoor, Pallavi and Chaudhary, Kumardeep and Gautam, Ankur and Kumar, Rahul and Raghava, G.P.S. (2013) In silico approach for predicting toxicity of peptides and protein. PloS one, 8 (9). e73957. ISSN 1932-6203

Gurram Rama, Krishna (2013) Induction of the Inhibition of Immune Response by Caerulomycin A. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

I

Iquebal, Mir Asif and Sarika, . and Dhanda, Sandeep Kumar and Arora, Vasu and Dixit, Sat Pal and Raghava, Gajendra P S and Rai, Anil and Kumar, Dinesh (2013) Development of a model webserver for breed identification using microsatellite DNA marker. BMC genetics, 14. p. 118. ISSN 1471-2156

J

Jain, Rishu and Sharma, Deepak and Kumar, Rajesh (2013) Effects of alcohols on the stability and low-frequency local motions that control the slow changes in structural dynamics of ferrocytochrome c. Journal of biochemistry, 154 (4). pp. 341-54. ISSN 1756-2651

Jain, Shweta and Chodisetti, Sathi Babu and Agrewala, J N (2013) Combinatorial Signaling through TLR-2 and CD86 Augments Activation and Differentiation of Resting B Cells. PloS one, 8 (1). e54392. ISSN 1932-6203

K

Kaur, Chandandeep and Pinnaka, Anil Kumar and Singh, Nitin Kumar and Bala, Monu and Mayilraj, Shanmugam (2013) Agromyces arachidis sp. nov. Isolated from a Peanut (Arachis hypogaea) Crop Field. International journal of microbiology, 2013. ISSN 1687-918X

Kaur, Navjot and Kumar, Shailesh and Bala, Monu and Raghava, G.P.S. and Mayilraj, Shanmugam (2013) Draft Genome Sequence of Amycolatopsis decaplanina Strain DSM 44594T. Genome announcements, 1 (2). e0013813. ISSN 2169-8287

Kaur, Rajwant and Kishore, Raghuvansh (2013) Isostructural unbranched alkyl-chains as tools for stabilizing β-turn structure. Biopolymers, 99 (7). pp. 419-26. ISSN 1097-0282

Kaur, Suneet (2013) Identification of Molecular Target of Caerulomycin A and Description of its Mechanism of Action. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Khan, Mohammad Aslam (2013) Anticancer agents and Cutaneous T Cell Lymphoma. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Khan, Mohd Sajjad and Ahmad, Iqbal and Cameotra, Swaranjit Singh (2013) Phenyl aldehyde and propanoids exert multiple sites of action towards cell membrane and cell wall targeting ergosterol in Candida albicans. AMB Express, 3 (1). p. 54. ISSN 2191-0855

Khan, Nargis and Agrewala, J N (2013) Immunomodulation through CD40 and TLR-4: an approach to control tuberculosis (P4516). Journal of Immunology, 190.

Khatri, Indu and Akhtar, Akil and Kaur, Kamaldeep and Tomar, Rajul and Prasad, Gandham Satyanarayana and Ramya, Thirumalai Nallan Chakravarthy and Subramanian, Srikrishna (2013) Gleaning evolutionary insights from the genome sequence of a probiotic yeast Saccharomyces boulardii. Gut Pathogens, 5 (1). p. 30. ISSN 1757-4749

Khatri, Indu and Dureja, Chetna and Raychaudhuri, Saumya and Subramanian, Srikrishna (2013) Draft Genome Sequence of the Opportunistic Human Pathogen Morganella morganii SC01. Genome announcements, 1 (1). ISSN 2169-8287

Khatri, Indu and Kaur, Sukhvir and Devi, Usha and Kumar, Navinder and Sharma, Deepak and Subramanian, Srikrishna and Saini, Adesh K (2013) Draft Genome Sequence of Plant Growth-Promoting Rhizobacterium Pantoea sp. Strain AS-PWVM4. Genome announcements, 1 (6). e00947-13. ISSN 2169-8287

Khatri, Indu and Mahajan, Sakshi and Dureja, Chetna and Subramanian, Srikrishna and Raychaudhuri, Saumya (2013) Evidence of a new metabolic capacity in an emerging diarrheal pathogen: lessons from the draft genomes of Vibrio fluvialis strains PG41 and I21563. Gut Pathogens, 5 (1). p. 20. ISSN 1757-4749

Khatri, Neelam (2013) Understanding the role of Fis in the context of the quorum sensing signal transduction in Vibrio cholerae and related Vibrio:Lesson from V. cholerae quorum sensing signal network. PhD thesis, CSIR-IMTECH,Chandigarh/ Jawaharlal Nehru University, New Delhi.

Kumar, Ravi (2013) Development of in-silico tools for understanding Human-HIV interactions and designing of therapeutics against HIV. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Kumar, Ravi and Raghava, G.P.S. (2013) Hybrid approach for predicting coreceptor used by HIV-1 from its V3 loop amino acid sequence. PloS one, 8 (4). e61437. ISSN 1932-6203

Kumar, Sanjay (2013) Studies on Peptide Deformylase from Intracelluar Pathogens. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Kumar, Shailesh and Bala, Monu and Raghava, G.P.S. and Mayilraj, Shanmugam (2013) Draft Genome Sequence of Rhodococcus triatomae Strain BKS 15-14. Genome announcements, 1 (2). e0012913. ISSN 2169-8287

Kumar, Shailesh and Kasturia, Neha and Sharma, Amit and Datt, Manish and Bachhawat, Anand K (2013) Redox-dependent stability of the γ-glutamylcysteine synthetase enzyme of Escherichia coli: a novel means of redox regulation. The Biochemical journal, 449 (3). pp. 783-94. ISSN 1470-8728

Kumar, Shailesh and Kaur, Chandandeep and Kimura, Kazuyuki and Takeo, Masahiro and Raghava, G.P.S. and Mayilraj, Shanmugam (2013) Draft Genome Sequence of the Type Species of the Genus Citrobacter, Citrobacter freundii MTCC 1658. Genome announcements, 1 (1). ISSN 2169-8287

Kumar, Shailesh and Kaur, Navjot and Singh, Nitin Kumar and Raghava, G.P.S. and Mayilraj, Shanmugam (2013) Draft Genome Sequence of Streptomyces gancidicus Strain BKS 13-15. Genome announcements, 1 (2). ISSN 2169-8287

Kumar, Shailesh and Vikram, Surendra and Raghava, G.P.S. (2013) Genome annotation of Burkholderia sp. SJ98 with special focus on chemotaxis genes. PloS one, 8 (8). e70624. ISSN 1932-6203

M

Malhotra, Ankit and Dolma, Kunzes and Kaur, Navjot and Rathore, Yogendra S and Ganguly, Ashish and Mayilraj, Shanmugam and Choudhury, Anirban Roy (2013) Biosynthesis of gold and silver nanoparticles using a novel marine strain of Stenotrophomonas. Bioresource technology, 142. pp. 727-31. ISSN 1873-2976

Mandal, Santi M and Sharma, Shalley and Pinnaka, Anil Kumar and Kumari, Annu and Korpole, Suresh (2013) Isolation and characterization of diverse antimicrobial lipopeptides produced by Citrobacter and Enterobacter. BMC microbiology, 13. ISSN 1471-2180

Mangal, Manu and Sagar, Parul and Singh, Harinder and Raghava, G.P.S. and Agarwal, Subhash M (2013) NPACT: Naturally Occurring Plant-based Anti-cancer Compound-Activity-Target database. Nucleic acids research, 41 (Databa). D1124-9. ISSN 1362-4962

N

Nanda, Jagpreet Singh (2013) Genetic and Biochemical Interactions between RNA Interference and Heterochromatin Assembly Pathways. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

Nandanwar, Hemraj and Prajapati, Rajnikant and Hoondal, G S (2013) (D)-p-Hydroxyphenylglycine production by thermostable D-hydantoinase from Brevibacillus parabrevis-PHG1. Biocatalysis and Biotransformation, 31 (1). ISSN 1024-2422

Nandanwar, Hemraj S and Vohra, Rakesh M and Hoondal, Gurinder S (2013) Enhanced stability of newly isolated trimeric l-methionine-N-carbamoylase from Brevibacillus reuszeri HSN1 by covalent immobilization. Biotechnology and applied biochemistry, 60 (3). pp. 305-15. ISSN 1470-8744

Nandanwar, Hemraj S and Vohra, Rakesh M and Hoondal, Gurinder S (2013) Trimeric l-N-carbamoylase from newly isolated Brevibacillus reuszeri HSN1: a potential biocatalyst for production of l-α-amino acids. Biotechnology and applied biochemistry, 60 (2). pp. 219-30. ISSN 1470-8744

Nangia, Yogesh Kumar (2013) Nanoparticles Based Biochemical Approaches for Monitoring Sulfonylurea Herbicides. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

P

Pal, Suksham and Choudhary, Vikas and Kumar, Anil and Biswas, Dipanwita and Mondal, Alok K and Sahoo, Debendra K (2013) Studies on xylitol production by metabolic pathway engineered Debaryomyces hansenii. Bioresource technology, 147. pp. 449-55. ISSN 1873-2976

Palaniappan, Krishna and Meier-Kolthoff, Jan P and Teshima, Hazuki and Nolan, Matt and Lapidus, Alla and Tice, Hope and Del Rio, Tijana Glavina and Cheng, Jan-Fang and Han, Cliff and Tapia, Roxanne and Goodwin, Lynne A and Pitluck, Sam and Liolios, Konstantinos and Mavromatis, Konstantinos and Pagani, Ioanna and Ivanova, Natalia and Mikhailova, Natalia and Pati, Amrita and Chen, Amy and Rohde, Manfred and Mayilraj, Shanmugam and Spring, Stefan and Detter, John C and Göker, Markus and Bristow, James and Eisen, Jonathan A and Markowitz, Victor and Hugenholtz, Philip and Kyrpides, Nikos C and Klenk, Hans-Peter and Woyke, Tanja (2013) Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio. Standards in genomic sciences, 9 (1). pp. 57-70. ISSN 1944-3277

Pandey, Kalpana (2013) UNDERSTAND THE GLYCOSYLATED FORM OF INFLUENZA A HEMAGGLUTININ TRIMER:TOWARDS IDENTIFICATION OF A NOVEL DRUG SITE. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

Pandya, Vaibhav Kumar (2013) Studies on Structural and Regulatory Mechanisms of Substrate Recognition and Catalysis by Carnosinase. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

Panwar, Bharat (2013) In silico analysis and prediction of aminoacyl-tRNA synthetases and their ligands. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Panwar, Bharat and Gupta, Sudheer and Raghava, G.P.S. (2013) Prediction of vitamin interacting residues in a vitamin binding protein using evolutionary information. BMC bioinformatics, 14. p. 44. ISSN 1471-2105

Peddada, Nagesh (2013) STRUCTURE-FUNCTION RELATIONSHIP OF HUMAN PLASMA GELSOLIN AND ITS MINIMAL VERSIONS. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

Peddada, Nagesh and Sagar, Amin and Rathore, Yogendra S and Choudhary, Vikas and Pattnaik, U Bharat K and Khatri, Neeraj and Garg, Renu and Ganguly, Ashish (2013) Global shapes of F-actin depolymerization-competent minimal gelsolins: insight into the role of g2-g3 linker in pH/Ca2+ insensitivity of the first half. The Journal of biological chemistry, 288 (39). pp. 28266-82. ISSN 1083-351X

Q

Qureshi, Abid and Thakur, Nishant and Kumar, Manoj (2013) HIPdb: A Database of Experimentally Validated HIV Inhibiting Peptides. PloS one, 8 (1). e54908. ISSN 1932-6203

Qureshi, Abid and Thakur, Nishant and Kumar, Manoj (2013) VIRsiRNApred: a web server for predicting inhibition efficacy of siRNAs targeting human viruses. Journal of translational medicine, 11. p. 305. ISSN 1479-5876

R

Rakshak, K and Ravinder, K and Nupur, . and Srinivas, T N R and Kumar, P Anil (2013) Caldimonas meghalayensis sp. nov., a novel thermophilic betaproteobacterium isolated from a hot spring of Meghalaya in northeast India. Antonie van Leeuwenhoek, 104 (6). pp. 1217-25. ISSN 1572-9699

Ramesh, Muthusamy and Bharatam, Prasad V and Venugopalan, P and Kishore, Raghuvansh (2013) Importance of C–H···O Intramolecular Hydrogen Bonding Across a Nonproteinogenic γ-Aminobenzoic Acid Residue: Stabilization of a Flat β-Strand-like Template. Crystal Growth & Design , 13 (5). pp. 2004-12.

Randhawa , Anmoldeep (2013) Functional Analysis of NIK1 Orthologs from Pathogenic Fungi. PhD thesis, JNU.

Ravala, Sandeep Kaur (2013) Studies on a mycobacterial eukaryotic-type serine/theronine kinase and its interacting partners. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Rawat, Sanjay (2013) Studies on polymer based biopharmaceuticals delivery system. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Roy, Anupam and Mahata, Denial and Paul, Debarati and Korpole, Suresh and Franco, Octavio L and Mandal, Santi M (2013) Purification, biochemical characterization and self-assembled structure of a fengycin-like antifungal peptide from Bacillus thuringiensis strain SM1. Frontiers in microbiology, 4. p. 332. ISSN 1664-302X

Roy, Somendu K and Kumari, Neela and Pahwa, Sonika and Agrahari, Udai C and Bhutani, Kamlesh K and Jachak, Sanjay M and Nandanwar, Hemraj (2013) NorA efflux pump inhibitory activity of coumarins from Mesua ferrea. Fitoterapia, 90. pp. 140-50. ISSN 1873-6971

S

Sablok, Kavita and Bhalla, Vijayender and Sharma, Priyanka and Kaushal, Roohi and Chaudhary, Shilpa and Suri, C Raman (2013) Amine functionalized graphene oxide/CNT nanocomposite for ultrasensitive electrochemical detection of trinitrotoluene. Journal of hazardous materials, 248-24. pp. 322-8. ISSN 1873-3336

Samuel, Jesse Sebastian (2013) Structure-function studies of recombinant human Erythropoietin (rHuEpo). PhD thesis, CSIR-IMTECH/Jawaharlal Nehru University,New Delhi.

Shalley, S and Pradip Kumar, S and Srinivas, T Naga Radha and Suresh, K and Anil Kumar, P (2013) Marinilabilia nitratireducens sp. nov., a lipolytic bacterium of the family Marinilabiliaceae isolated from marine solar saltern. Antonie van Leeuwenhoek, 103 (3). pp. 519-25. ISSN 1572-9699

Sharma, Gunjan and Kumar, Navinder and Weir, , Bevan S. and Hyde, Kevin D. and Shenoy,, Belle Damodara (2013) The ApMat marker can resolve Colletotrichum species: a case study with Mangifera indica. Fungal Divers. Fungal Diversity, 61 (1). pp. 117-138.

Sharma, Priyanka (2013) Antibody functionalsed nanobioprobes: Characterization and bioessay development for phenylurea herbicides. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.

Sharma, Priyanka and Kukkar, Manil and Ganguli, Ashok K and Bhasin, Aman and Suri, C Raman (2013) Plasmon enhanced fluoro-immunoassay using egg yolk antibodies for ultra-sensitive detection of herbicide diuron. The Analyst, 138 (15). pp. 4312-20. ISSN 1364-5528

Sharma, Priyanka and Tuteja, Satish K and Bhalla, Vijayender and Shekhawat, G and Dravid, Vinayak P and Suri, C Raman (2013) Bio-functionalized graphene-graphene oxide nanocomposite based electrochemical immunosensing. Biosensors & bioelectronics, 39 (1). pp. 99-105. ISSN 1873-4235

Sheokand, Navdeep and Kumar, Santosh and Malhotra, Himanshu and Tillu, Vikas and Raje, Chaaya Iyengar and Raje, Manoj (2013) Secreted glyceraldehye-3-phosphate dehydrogenase is a multifunctional autocrine transferrin receptor for cellular iron acquisition. Biochimica et biophysica acta, 1830 (6). pp. 3816-27. ISSN 0006-3002

Shivaji, Sisinthy and Ara, Sreenivas and Begum, Zareena and Srinivas, T N R and Singh, Aditya and Kumar Pinnaka, Anil (2013) Draft Genome Sequence of Cesiribacter andamanensis Strain AMV16T, Isolated from a Soil Sample from a Mud Volcano in the Andaman Islands, India. Genome announcements, 1 (3). e00240-13. ISSN 2169-8287

Shukla, Poonam (2013) Investigation into and Validation of the prion function of Cut4p subunit of Anaphase promoting complex (APC) in Fission Yeast. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

Singh, Harinder and Ansari, Hifzur Rahman and Raghava, G.P.S. (2013) Improved method for linear B-cell epitope prediction using antigen's primary sequence. PloS one, 8 (5). e62216. ISSN 1932-6203

Singh, Mirage and Kumar, Pankaj and Yadav, Savita and Gautam, Ruchi and Sharma, Nidhi and Karthikeyan, Subramanian (2013) The crystal structure reveals the molecular mechanism of bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II (Rv1415) from Mycobacterium tuberculosis. Acta crystallographica. Section D, Biological crystallography, 69 (Pt 9). pp. 1633-44. ISSN 1399-0047

Singh, Naorem Santa (2013) The Functional evaluation of variant HapR and HapR homologues in the context of DNA-Protein interactions:Lessons from a natural HapR variant. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

Singh, Nitin Kumar and Kumar, Shailesh and Raghava, G.P.S. and Mayilraj, Shanmugam (2013) Draft Genome Sequence of Acinetobacter baumannii Strain MSP4-16. Genome announcements, 1 (2). e0013713. ISSN 2169-8287

Singh, Nitin Kumar and Raichand, Revti and Kaur, Ishwinder and Kaur, Chandandeep and Pareek, Siddhika and Mayilraj, Shanmugam (2013) Exiguobacterium himgiriensis sp. nov. a novel member of the genus Exiguobacterium, isolated from the Indian Himalayas. Antonie van Leeuwenhoek, 103 (4). pp. 789-96. ISSN 1572-9699

Singh, Richa and Rathore, Yogendra Singh and Singh, Naorem Santa and Peddada, Nagesh and Ashish, . and Raychaudhuri, Saumya (2013) Substitution of glutamate residue by lysine in the dimerization domain affects DNA binding ability of HapR by inducing structural deformity in the DNA binding domain. PloS one, 8 (10). e76033. ISSN 1932-6203

Singh, Shikha (2013) Understanding the Structural Composition of TIR Domain in TLRs: Elucidating their Role in Functional Assembly. PhD thesis, CSIR-IMTECH,Chandigarh/Jawaharlal Nehru University,New Delhi.

Singh, Shikha and Pandey, Kalpana and Rathore, Yogendra S and Sagar, Amin and Pattnaik, U Bharat K and Ganguly, Ashish (2013) A communication network within the cytoplasmic domain of toll-like receptors has remained conserved during evolution. Journal of biomolecular structure & dynamics. ISSN 1538-0254

Singh, Shoor Vir and Kumar, Naveen and Singh, Shree Narayan and Bhattacharya, Tapas and Sohal, Jagdip Singh and Singh, Pravin Kumar and Singh, Ajay Vir and Singh, Brajesh and Chaubey, Kundan Kumar and Gupta, Saurabh and Sharma, Nitu and Kumar, Shailesh and Raghava, G.P.S. (2013) Genome Sequence of the "Indian Bison Type" Biotype of Mycobacterium avium subsp. paratuberculosis Strain SS. Genome announcements, 1 (1). ISSN 2169-8287

Singla, Deepak and Dhanda, Sandeep Kumar and Chauhan, Jagat S and Bhardwaj, Anshu and Brahmachari, Samir K and Raghava, G.P.S. (2013) Open source software and web services for designing therapeutic molecules. Current topics in medicinal chemistry, 13 (10). pp. 1172-91. ISSN 1873-4294

Singla, Deepak and Tewari, Rupinder and Kumar, Ashwani and Raghava, G.P.S. (2013) Designing of inhibitors against drug tolerant Mycobacterium tuberculosis (H37Rv). Chemistry Central journal, 7 (1). p. 49. ISSN 1752-153X

Solanki, Ashish K (2013) GLOBAL STRUCTURE ANALYSIS OF MONOCLONAL ANTIBODIES RECOGNIZING ENVELOPE COMPONENTS, gp120 AND gp41, OF HIV-1. PhD thesis, CSIR-IMTECH Chandigarh/ Jawaharlal Nehru University, New Delhi.

Srinivas, T N R and Kailash, T B and Anil Kumar, P (2013) Silanimonas mangrovi sp. nov., a member of the family Xanthomonadaceae isolated from mangrove sediment, and emended description of the genus Silanimonas. International journal of systematic and evolutionary microbiology, 63 (Pt 1). pp. 274-9. ISSN 1466-5034

Srinivasan, Vijaya Bharathi and Mondal, Amitabha and Venkataramaiah, Manjunath and Chauhan, Neeraj Kumar and Rajamohan, Govindan (2013) Role of oxyRKP, a novel LysR-family transcriptional regulator, in antimicrobial resistance and virulence in Klebsiella pneumoniae. Microbiology (Reading, England), 159 (Pt 7). pp. 1301-14. ISSN 1465-2080

Srinivasan, Vijaya Bharathi and Rajamohan, Govindan (2013) KpnEF, a new member of the Klebsiella pneumoniae cell envelope stress response regulon, is an SMR-type efflux pump involved in broad-spectrum antimicrobial resistance. Antimicrobial agents and chemotherapy, 57 (9). pp. 4449-62. ISSN 1098-6596

T

Tripathi, Ranjana and Kaithwas, Vikas and Dureja, Chetna and Raychaudhuri, Saumya (2013) Alanine-scanning mutagenesis of WH2 domains of VopF reveals residues important for conferring lethality in a Saccharomyces cerevisiae model. Gene, 525 (1). pp. 116-23. ISSN 1879-0038

Tuli, Amit and Thiery, Jerome and James, Ashley M and Michelet, Xavier and Sharma, Mahak and Garg, Salil and Sanborn, Keri B and Orange, Jordan S and Lieberman, Judy and Brenner, Michael B (2013) Arf-like GTPase Arl8b regulates lytic granule polarization and natural killer cell-mediated cytotoxicity. Molecular biology of the cell, 24 (23). pp. 3721-35. ISSN 1939-4586

Tyagi, Atul and Kapoor, Pallavi and Kumar, Rahul and Chaudhary, Kumardeep and Gautam, Ankur and Raghava, G.P.S. (2013) In silico models for designing and discovering novel anticancer peptides. Scientific reports, 3. p. 2984. ISSN 2045-2322

V

Vikram, Surendra (2013) Understanding and Characterization of Genome of Barkholderia sp. strain SJ 98 using bioinformatics and experimental Techniques. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.

Vikram, Surendra and Kumar, Shailesh and Vaidya, Bhumika and Pinnaka, Anil Kumar and Raghava, G.P.S. (2013) Draft Genome Sequence of the 2-Chloro-4-Nitrophenol-Degrading Bacterium Arthrobacter sp. Strain SJCon. Genome announcements, 1 (2). e00058-13. ISSN 2169-8287

Vikram, Surendra and Pandey, Janmejay and Kumar, Shailesh and Raghava, G.P.S. (2013) Genes involved in degradation of para-nitrophenol are differentially arranged in form of non-contiguous gene clusters in Burkholderia sp. strain SJ98. PloS one, 8 (12). e84766. ISSN 1932-6203

Y

Yi, Hankuil and Dey, Sanghamitra and Kumaran, Sangaralingam and Lee, Soon Goo and Krishnan, Hari B and Jez, Joseph M (2013) Structure of soybean serine acetyltransferase and formation of the cysteine regulatory complex as a molecular chaperone. The Journal of biological chemistry, 288 (51). pp. 36463-72. ISSN 1083-351X

This list was generated on Sat Oct 24 14:28:38 2020 IST.