Home | Search | Advance Search | Browse | HIVsirMut | Tools | Download Online Submission | Documentation & FAQ | Team | Contact

Page - 1 of 1 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) GC Content (%) Cell line PubMed 1390 HIV-1 (NL4-3) AF324493 Rev N/A GGUAGCUGAAGAGGCACAGGC 61.00 50 Hela 18510865 1091 HIV-1 (NL4-3) AF324493 Int 4539 AAUUAGCAGGAAGAUGGCCAG 61.00 38 293 T 15750613 1207 HIV-1 HXB2 K03455 Gag 2833 AAGAAAAAAUCAGUAACAGUAC 61.00 22 Hela 17132935 1016 HIV-1 (NL4-3) AF324493 Tat 5968 UAUGGCAGGAAGAAGCGGA 61.00 42 jurkat 12438622 1421 HIV-1 (LAI) K02013 Nef 8664 AAGAAAAGGGGGGACUGGA 61.00 42 293 T 19384894 1420 HIV-1 (LAI) K02013 Tat/Rev 5551 AUGGCAGGAAGAAGCGGAG 61.00 46 293 T 19384894 1406 HIV-1 (LAI) K02013 Gag 333 GAGAUGGGUGCGAGAGCGU 61.00 50 293 T 19384894 1279 95MM-yIDU106 N/A LTR 690 CGCAGGACUCGGCUUGCUGAA 61.20 50 Hela 17996047 1451 HIV-1 (NL4-3) AF324493 Pol 404 CUACACCUGUCAACAUAAUU 61.30 28 HEK 293a 19497094 1077 N/A N/A Gag 1607 AAUAGUAAGAAUGUAUAGCCC 62.00 27 293 T 15750613 1376 HIV-1 (NL4-3) AF324493 LTR 259 GCGCACGGCAAGAGGCGAGGG 62.00 62 Hela 18208841 1391 HIV-1 (NL4-3) AF324493 Rev N/A GAGGGGACCAGGGAGAGCA 63.00 54 Hela 18510865 1137 HIV-1 (LAI) K02013 Pol 1957 AUGGAAACCAAAAAUGAUA 63.00 21 293 T 16959541 1061 HIV-1 (NL4-3) AF324493 Nef 9059 AAAAGAAAAGGGGGGACUGGA 63.00 38 293 T 15564478 1231 HIV-1 (NL4-3) AF324493 LTR 505 GGGAACCCACUGCUUAAGCCU 63.80 46 Hela 17996047 1672 HIV-1NL4-3 AF324493 Tat/Rev 3090 UAUCAAUACAUGGAUGAUUUGUAU 64.00 21 Hela 16290277 1017 HIV-1 (NL4-3) AF324493 Tat 5851 CUAGAGCCCUGGAAGCAUC 64.00 46 jurkat 12438622 1130 HIV-1 (LAI) K02013 Gag 1364 AGAAGAAAUGAUGACAGCA 64.00 29 293 T 16959541 1514 HIV-1 (NL4-3) AF324493 Env 2308 AGAGACUUACUCUUGAUUGU 64.40 28 HEK 293a 19497094 1606 Hiv-1 c AF290027 Env 7803 CCUUGGGUUCUUAGGAGCU 64.60 42 293T/EcR 15894278 1107 HIV-1 (NL4-3) AF324493 Tat 5888 CUGCUUGUACCAAUUGCUA 65.00 33 293 T 16840344

©2011 HIVsirDB | All Rights Reserved |