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Next   PreviousPage - 1 of 4 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) GC Content (%) Cell line PubMed 1670 HIV-1 (NL4-3) AF324493 Env 7490 CAUGUGGCAGGAAGUAGGA 98.00 42 COS cells 17176628 1543 HIV-1 (LAI) K02013 Nef 9081 GGGACUGGAAGGGCUAAUU 95.00 42 293 T 16948865 1534 HIV-1 (LAI) K02013 Pol 4122 UAGCAGGAAGAUGGCCAGU 37.00 42 293 T 20188764 1530 HIV-1 (NL4-3) AF324493 LTR 324 GACUGCUGACAUCGAGCUU 0.00 42 MAGIC-5 19771207 1434 HIV-1 (NL4-3) AF324493 Gag 533 GAGCCACCCCACAAGAUUU 95.90 42 HEK 293a 19497094 1551 HIV-1 (LAI) K02013 Nef N/A GGGACUGGAAGGGCUAAUU 95.00 42 293 T 19672247 1622 NL4-3 clone 1-D4 AF078150 Int 158 GUAGACUGUAGCCCAGGAA 49.00 42 Hela 17592732 1227 HIV-1 (LAI) K02013 Nef 9081 GGGACUGGAAGGGCUAAUU -99.00 42 293 T 17628029 1223 HIV-1 (LAI) K02013 Pol 4522 AGGUGAAGGGGCAGUAGUA 44.00 42 293 T 17628029 1221 HIV-1 (LAI) K02013 Pol 4122 UAGCAGGAAGAUGGCCAGU 22.00 42 293 T 17628029 1211 HIV-1 (LAI) AF33819.3 Nef N/A AAGAAAAGGGGGGACUGGA 98.00 42 HEK 293 17331227 1117 HIV-1 (LAI) K02013 Nef 9081 GGGACUGGAAGGGCUAAUU 88.00 42 293 T 16948865 1108 HIV-1 (NL4-3) AF324493 Int 4285 GGAGAGCAAUGGCUAGUGA 78.00 42 293 T 16840344 1579 HIV-1(P89) K02013 rev K*8485 GGCACUUAUCUGGGACGAU 23.00 42 Hela 15831707 1576 HIV-1(BAL) K02013 rev K*8485 GGCACUUAUCUGGGACGAU 75.00 42 Hela 15831707 1667 HIV-1 (NL4-3) AF324493 Env 7490 CAUGUGGCAGGAAGUAGGA 97.00 42 COS cells 17176628 1660 HIV-1NL4-3 AF324493 Env 7490 CAUGUGGCAGGAAGUAGGA 91.00 42 COS Cells 17176628 1621 NL4-3 clone 1-D4 AF078150 Int 79 CCUACCACCUGUAGUAGCA 11.00 42 Hela 17592732 1620 NL4-3 clone 1-D4 AF078150 Int 19 GGCCCAAGAAGAACAUGAG 90.00 42 Hela 17592732 1612 HIV-1 (NL4-3) AF324493 Pol 324 GACUGCUGACAUCGAGCUU 0.00 42 MAGIC 18519571 1593 HIV-1 (LAI) K02013 Tat/Rev N/A GCCUUAGGCAUCUCCUAUG 0.00 42 SupT1 14963165 1596 HIV-1 (LAI) K02013 LTR N/A GGCUAGAAGGAGAGAGAUG 0.00 42 SupT1 14963165 1602 HIV-1 (LAI) K02013 Gag 1023 GAACCAAGGGGAAGUGACA 92.00 42 293 T 17715143 1603 HIV-1 (LAI) K02013 Nef 9081 GGGACUGGAAGGGCUAAUU 90.00 42 293 T 17715143 1606 Hiv-1 c AF290027 Env 7803 CCUUGGGUUCUUAGGAGCU 64.60 42 293T/EcR 15894278

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