A database of experimentally validated
chemically modified siRNAs
Home
How to use
FAQs
Browse
Modification in sense
Position in sense strand
Modification in antisense
Position in antisense
Reference
Search
Basic
Structure
Unique Mod
Control siRNA
Tools
Blast
Map
Update
About
Stats
Links
Downloads
Developers
Contact us
BLAST Search
siRNAmod Blast
Blast your siRNA sequence against siRNAmod.
Enter your siRNA sequence below in
FASTA
format
Example
>XYZ
GCGCUGCUGGUGCCAACCCTTGCAG
Or load it from disk
Expect
0.0001
0.01
1
10
100
1000
Matrix
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Perform ungapped alignment
Other advanced options:
Graphical Overview
Alignment view
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
BLAST XML
Hit Table
Descriptions
0
10
50
100
250
500
Alignments
0
10
50
100
250
500
Color schema
Color schema 1
Color schema 2
Color schema 3
Color schema 4
Color schema 5
Color schema 6
No color schema