Field | Sense | Antisense |
siRNA chemical modification | 4-C-Hydroxymethyl Deoxyribonucleic acid | 2-O-Methyl |
siRNA modification types | 1 | 1 |
Overall number of modifications | 3 | 1 |
Position of modifications | 5,19,20 | 2 |
Modification on sugar or base or phosphate | Sugar | Sugar |
SMILES (Click to view structure & nomenclature) |
OCC1(CO)OCCC1 |
COC1C(O)OC(CO)C1O |
siRNA Sequence | GACGTAAACGGCCACAAGTTC | ACUUGUGGCCGUUUACGUCGC |
siRNA length base-pair | 21 | 21 |
siRNA name in paper | JW1189 | DHARM1 |
Biological activity | 74.6 percent target mRNA inhibition | |
Experiment used to check activity | Luciferase reporter assay | |
Melting temperature (oC) | NA | |
Target gene | EGFP gene | |
siRNA concentration | 10 nM | |
Cell or Organism used | HeLa cells | |
Transfection method | Interfer (Polypus -Transfection) | |
Duration after transfection | 72 Hours | |
Article title | A large-scale chemical modification screen identifies design rules to generate siRNAs with high activity, high stability and low toxicity |
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Reference | 19282453 |