Field | Sense | Antisense |
siRNA chemical modification | 2-N-Adamant-1-yl-Methylcarbonyl-2-Amino-Locked nucleic acid* Locked nucleic acid | Altritol nucleic acid |
siRNA modification types | 2 | 1 |
Overall number of modifications | 3 | 6 |
Position of modifications | 5,20 * 21 | 3,6,14,18,20,21 |
Modification on sugar or base or phosphate | Sugar | Sugar |
SMILES (Click to view structure & nomenclature) |
OCC12CN(C(CO1)C2O)C(=O)CC12CC3CC(CC(C3)C1)C2 OCC12COC(CO1)C2O |
OCC12COC(CO1)C2O |
siRNA Sequence | GACGTAAACGGCCACAAGUTCU | ACUUGUGGCCGUUUACGUCGCU |
siRNA length base-pair | 22 | 22 |
siRNA name in paper | W069 | GS2378 |
Biological activity | 70.2 percent target mRNA inhibition | |
Experiment used to check activity | Luciferase reporter assay | |
Melting temperature (oC) | NA | |
Target gene | EGFP gene | |
siRNA concentration | 10 nM | |
Cell or Organism used | HeLa cells | |
Transfection method | Interfer (Polypus -Transfection) | |
Duration after transfection | 72 Hours | |
Article title | A large-scale chemical modification screen identifies design rules to generate siRNAs with high activity, high stability and low toxicity |
|
Reference | 19282453 |