Field | Sense | Antisense |
siRNA chemical modification | Oxetane-Locked nucleic acid | Hexitol nucleic acid* 2-Deoxy |
siRNA modification types | 1 | 2 |
Overall number of modifications | 2 | 4 |
Position of modifications | 2,4 | 18,19,20 * 21 |
Modification on sugar or base or phosphate | Sugar | Sugar |
SMILES (Click to view structure & nomenclature) |
OCC1OC2OC2C1O |
OCC1OCCCC1O OCC1OCCC1O |
siRNA Sequence | GACGUAAACGGCCACAAGUUC | ACUUGUGGCCGUUUACGUCGT |
siRNA length base-pair | 21 | 21 |
siRNA name in paper | JC2 | GS2537 |
Biological activity | 85.7 percent target mRNA inhibition | |
Experiment used to check activity | Luciferase reporter assay | |
Melting temperature (oC) | NA | |
Target gene | EGFP gene | |
siRNA concentration | 10 nM | |
Cell or Organism used | HeLa cells | |
Transfection method | Interfer (Polypus -Transfection) | |
Duration after transfection | 72 Hours | |
Article title | A large-scale chemical modification screen identifies design rules to generate siRNAs with high activity, high stability and low toxicity |
|
Reference | 19282453 |