SM2294 Chemically modified siRNA information

Field Sense Antisense
siRNA chemical modification 2-Fluoro* 2-O-Methyl* 5-Phosphate 2-O-Methyl* 2-Fluoro* 5-Phosphate
siRNA modification types 3 3
Overall number of modifications 20 20
Position of modifications 1,3,5,7,9,11,13,15,17,19 * 2,4,6,8,10,12,14,16,18 * 1 1,3,5,7,9,11,13,15,17,19 * 2,4,6,8,10,12,14,16,18 * 1
Modification on sugar or base or phosphate Sugar Sugar; Sugar; Phosphate
SMILES
(Click to view structure & nomenclature)
OCC1OCC(F)C1O
COC1C(O)OC(CO)C1O
OC1COC(COP(O)([O-])=O)C1O

COC1C(O)OC(CO)C1O
OCC1OCC(F)C1O
OC1COC(COP(O)([O-])=O)C1O

siRNA Sequence AAGUAAGGACCAGAGACAA UUGUCUCUGGUCCUUACUU
siRNA length base-pair 19 19
siRNA name in paper 8 8
Biological activity 75 percent target mRNA inhibition ( IC-50 = 0.068 nM)
Experiment used to check activity Real-time PCR
Melting temperature (oC) NA
Target gene Human PTEN gene
siRNA concentration 1 nM
Cell or Organism used HeLa cells
Transfection method Lipofectin (Invitrogen)
Duration after transfection 20 Hours
Article title Fully 2'-modified oligonucleotide duplexes with improved in vitro potency and stability compared to unmodified small interfering RNA
Reference15715458