Field | Sense | Antisense |
siRNA chemical modification | 0 | Wobble Base Pair* 2-Thiouridine |
siRNA modification types | 0 | 2 |
Overall number of modifications | 0 | 2 |
Position of modifications | 0 | 8 * 9 |
Modification on sugar or base or phosphate | 0 | Base |
SMILES (Click to view structure & nomenclature) |
- |
- OCC1OC(C(O)C1O)N1C=CC(=O)NC1=S |
siRNA Sequence | AGCUUUGUGGAGAUGGUGGTT | CCACCAUCUCCACAAAGCUTT |
siRNA length base-pair | 21 | 21 |
siRNA name in paper | sB | aW8s2U9 |
Biological activity | 67 percent target mRNA inhibition | |
Experiment used to check activity | Dual fluorescence assay | |
Melting temperature (oC) | NA | |
Target gene | EGFP gene | |
siRNA concentration | 5 nM | |
Cell or Organism used | HeLa cells | |
Transfection method | Lipofectamine 2000 | |
Duration after transfection | 36 Hours | |
Article title | Effect of base modifications on structure, thermodynamic stability, and gene silencing activity of short interfering RNA |
|
Reference | 17585051 |