SM2409 Chemically modified siRNA information

Field Sense Antisense
siRNA chemical modification 2-Deoxythymidine L-Isonucleoside uracil* 2-Deoxythymidine
siRNA modification types 1 2
Overall number of modifications 2 3
Position of modifications 20,21 12* 20,21
Modification on sugar or base or phosphate Sugar Nucleoside
SMILES
(Click to view structure & nomenclature)
CC1=CN(C2CC(O)C(CO)O2)C(=O)NC1=O



OCC1OCC(C1OP(O)([O-])=O)N1C=CC(=O)NC1=O
CC1=CN(C2CC(O)C(CO)O2)C(=O)NC1=O


siRNA Sequence GCAACUCAUGGUUCAUGCUTT AGCAUGAACCAUGAGUUGCTT
siRNA length base-pair 21 21
siRNA name in paper siMek1-A12L siMek1-A12L
Biological activity 0 percent target mRNA inhibition
Experiment used to check activity Dual luciferase reporter assay
Melting temperature (oC) 55.6
Target gene MEK1 gene
siRNA concentration 10 nM
Cell or Organism used HEK293 cells
Transfection method Lipofectamine 2000
Duration after transfection 24 Hours
Article title Effects of conformational alteration induced by D-/L-isonucleoside incorporation in siRNA on their stability in serum and silencing activity
Reference23682837