Field | Sense | Antisense |
siRNA chemical modification | 2-Fluoro | 2-Fluoro |
siRNA modification types | 1 | 1 |
Overall number of modifications | 8 | 11 |
Position of modifications | 1,4,8,9,11,14,15,18 | 1,3,4,7,8,10,13,14,15,17,18 |
Modification on sugar or base or phosphate | Sugar | Sugar |
SMILES (Click to view structure & nomenclature) |
OCC1OCC(F)C1O |
OCC1OCC(F)C1O |
siRNA Sequence | CAGCAAACCACGAUCAAUATT | UAUUGAUCGUGGUUUGCUGTT |
siRNA length base-pair | 21 | 21 |
siRNA name in paper | si-1 F | si-1 F |
Biological activity | 71 percent target mRNA inhibition | |
Experiment used to check activity | Real-time PCR | |
Melting temperature (oC) | NA | |
Target gene | 5'UTR Enterovirus 71 | |
siRNA concentration | 50 nM | |
Cell or Organism used | Rhabdomyosarcoma cells | |
Transfection method | Lipofectamine 2000 | |
Duration after transfection | 6 Hours | |
Article title | The highly conserved 5' untranslated region as an effective target towards the inhibition of Enterovirus 71 replication by unmodified and appropriate 2'-modified siRNAs |
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Reference | 22889374 |