Field | Sense | Antisense |
siRNA chemical modification | 2-Deoxyribonucleotide* Inverted abasic | 2-Deoxyribonucleotide* Inverted abasic |
siRNA modification types | 2 | 2 |
Overall number of modifications | 4 | 4 |
Position of modifications | 22,23 * 1,23 | 22,23 * 1,23 |
Modification on sugar or base or phosphate | Sugar | Sugar |
SMILES (Click to view structure & nomenclature) |
OCC1OCCC1O CC1COC(CO)C1OP(O)([O-])=O |
OCC1OCCC1O CC1COC(CO)C1OP(O)([O-])=O |
siRNA Sequence | CGUUAGCAGAAACAAAAGGAGTT | CUCCUUUUGUUUCUGCUAACGTT |
siRNA length base-pair | 23 | 23 |
siRNA name in paper | PTEN5A | PTEN5B |
Biological activity | Low mRNA target inhibition efficacy | |
Experiment used to check activity | Real-time PCR | |
Melting temperature (oC) | NA | |
Target gene | Human PTEN gene | |
siRNA concentration | 1 to 40 nM | |
Cell or Organism used | HeLa cells | |
Transfection method | Oligofectamine (Invitrogen) | |
Duration after transfection | 48 Hours | |
Article title | Structural variations and stabilising modifications of synthetic siRNAs in mammalian cells |
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Reference | 12771196 |