SM2513 Chemically modified siRNA information

Field Sense Antisense
siRNA chemical modification 2-Deoxyribonucleotide* Inverted abasic 2-Deoxyribonucleotide* Inverted abasic
siRNA modification types 2 2
Overall number of modifications 4 4
Position of modifications 22,23 * 1,23 22,23 * 1,23
Modification on sugar or base or phosphate Sugar Sugar
SMILES
(Click to view structure & nomenclature)
OCC1OCCC1O
CC1COC(CO)C1OP(O)([O-])=O


OCC1OCCC1O
CC1COC(CO)C1OP(O)([O-])=O


siRNA Sequence CGUUAGCAGAAACAAAAGGAGTT CUCCUUUUGUUUCUGCUAACGTT
siRNA length base-pair 23 23
siRNA name in paper PTEN5A PTEN5B
Biological activity Low mRNA target inhibition efficacy
Experiment used to check activity Real-time PCR
Melting temperature (oC) NA
Target gene Human PTEN gene
siRNA concentration 1 to 40 nM
Cell or Organism used HeLa cells
Transfection method Oligofectamine (Invitrogen)
Duration after transfection 48 Hours
Article title Structural variations and stabilising modifications of synthetic siRNAs in mammalian cells
Reference12771196