Field | Sense | Antisense |
siRNA chemical modification | 2-O-Methyl | 2-O-Methyl |
siRNA modification types | 1 | 1 |
Overall number of modifications | 17 | 17 |
Position of modifications | 3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,20 | 3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19 |
Modification on sugar or base or phosphate | Sugar | Sugar |
SMILES (Click to view structure & nomenclature) |
COC1C(O)OC(CO)C1O |
COC1C(O)OC(CO)C1O |
siRNA Sequence | CUCCUUUUGUUUCUGCUAACG | CGUUAGCAGAAACAAAGGAG |
siRNA length base-pair | 21 | 20 |
siRNA name in paper | PTEN V2 | PTEN V2 |
Biological activity | Low mRNA target inhibition efficacy | |
Experiment used to check activity | Real-time PCR | |
Melting temperature (oC) | NA | |
Target gene | Human PTEN gene | |
siRNA concentration | 1 to 40 nM | |
Cell or Organism used | HeLa cells | |
Transfection method | Oligofectamine (Invitrogen) | |
Duration after transfection | 48 Hours | |
Article title | Structural variations and stabilising modifications of synthetic siRNAs in mammalian cells |
|
Reference | 12771196 |