Field | Sense | Antisense |
siRNA chemical modification | Boranophosphate | Boranophosphate |
siRNA modification types | 1 | 1 |
Overall number of modifications | 17 | 4 |
Position of modifications | 2,3,4,5,6,7,8,9,11,12,14,15,17,18,19,20,21 | 4,7,10,19 |
Modification on sugar or base or phosphate | Phosphate | Phosphate |
SMILES (Click to view structure & nomenclature) |
BP(O)(=O)OC1C(O)COC1CO |
BP(O)(=O)OC1C(O)COC1CO |
siRNA Sequence | GUUCACCUUGAUGCCGUUCUU | GAACGGCAUCAAGGUGAACUU |
siRNA length base-pair | 21 | 21 |
siRNA name in paper | EGFP1 AB3SBC | EGFP1 AB3SBC |
Biological activity | 52 percent target mRNA inhibition | |
Experiment used to check activity | FACS and cellular RNA analysis | |
Melting temperature (oC) | NA | |
Target gene | EGFP gene | |
siRNA concentration | 25 nM | |
Cell or Organism used | HeLa cells | |
Transfection method | Oligofectamine (Invitrogen) | |
Duration after transfection | 54 Hours | |
Article title | RNA interference using boranophosphate siRNAs: structure-activity relationships |
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Reference | 15545637 |