SM3104 Chemically modified siRNA information

Field Sense Antisense
siRNA chemical modification 2-Deoxy-2-Fluoroarabinonucleic acid 2-Deoxy-2-Fluoro-4-Thioarabinonucleic acid
siRNA modification types 1 1
Overall number of modifications 21 1
Position of modifications 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21 13
Modification on sugar or base or phosphate Sugar Sugar
SMILES
(Click to view structure & nomenclature)
OCC1OC(O)C(F)C1O



OCC1SCC(F)C1O



siRNA Sequence GCTTGAAGTCTTTAATTAAGG UUAAUUAAAGACUUCAAGCGG
siRNA length base-pair 21 21
siRNA name in paper T2-f T2-f
Biological activity IC-50 = 17 nM for target mRNA
Experiment used to check activity Luciferase reporter assay
Melting temperature (oC) 61
Target gene Luciferase gene
siRNA concentration 17 nM
Cell or Organism used HeLa X1/5 cells
Transfection method Lipofectamine-plus reagent (Invitrogen)
Duration after transfection 24 Hours
Article title 2'-fluoro-4'-thioarabino-modified oligonucleotides: conformational switches linked to siRNA activity
Reference17284457