Field | Sense | Antisense |
siRNA chemical modification | 2-O-Lysylaminohexyl | 2-O-Lysylaminohexyl |
siRNA modification types | 1 | 1 |
Overall number of modifications | 2 | 2 |
Position of modifications | 6,18 | 7,14 |
Modification on sugar or base or phosphate | Sugar | Sugar |
SMILES (Click to view structure & nomenclature) |
CCC1OCC(OCCCCCCNC(=O)C(CCCCNC(=O)C(F)(F)F)NC(=O)C(F)(F)F)C1O |
CCC1OCC(OCCCCCCNC(=O)C(CCCCNC(=O)C(F)(F)F)NC(=O)C(F)(F)F)C1O |
siRNA Sequence | TTAUCUCCAUGCACGACUCCG | UAGAGGUACGUGCUGAGGCTT |
siRNA length base-pair | 21 | 21 |
siRNA name in paper | 27 | 27 |
Biological activity | 37 percent target mRNA inhibition | |
Experiment used to check activity | HPLC analysis | |
Melting temperature (oC) | NA | |
Target gene | ICAM-1 gene | |
siRNA concentration | 25 and 50 nM | |
Cell or Organism used | ECV304 | |
Transfection method | Lipofectamine 2000 | |
Duration after transfection | 24 Hours | |
Article title | 2'-O-Lysylaminohexyl oligonucleotides: modifications for antisense and siRNA |
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Reference | 17979170 |